RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 V9GYY5 206 aaPredicted RBP15.92■□□□□ 0.14
UBFD1-207ENST00000567212 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 SEC24BO95487 1268 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 FAM193AP78312 1265 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 FERMT3Q86UX7 667 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 ADCY5O95622 1261 aa15.91■□□□□ 0.14
UBFD1-207ENST00000567212 TBC1D32Q96NH3 1257 aa15.91■□□□□ 0.14
UBFD1-207ENST00000567212 NAT10Q9H0A0 1025 aaKnown RBP15.91■□□□□ 0.14
UBFD1-207ENST00000567212 CFTRP13569 1480 aa15.91■□□□□ 0.14
UBFD1-207ENST00000567212 LMOD3Q0VAK6 560 aa15.91■□□□□ 0.14
UBFD1-207ENST00000567212 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
UBFD1-207ENST00000567212 CCDC94Q9BW85 323 aaPredicted RBP15.91■□□□□ 0.14
UBFD1-207ENST00000567212 CPLX1O14810 134 aa15.91■□□□□ 0.14
UBFD1-207ENST00000567212 WDR33Q9C0J8 1336 aaKnown RBP15.91■□□□□ 0.14
UBFD1-207ENST00000567212 CT47B1P0C2W7 299 aaPredicted RBP15.9■□□□□ 0.14
UBFD1-207ENST00000567212 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
UBFD1-207ENST00000567212 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
UBFD1-207ENST00000567212 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
UBFD1-207ENST00000567212 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
UBFD1-207ENST00000567212 NOLC1Q14978 699 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBFD1-207ENST00000567212 EIF2S2P20042 333 aaKnown RBP15.89■□□□□ 0.13
UBFD1-207ENST00000567212 TSC1Q92574 1164 aa15.89■□□□□ 0.13
UBFD1-207ENST00000567212 ZKSCAN5Q9Y2L8 839 aa15.89■□□□□ 0.13
UBFD1-207ENST00000567212 SLFN5Q08AF3 891 aa15.89■□□□□ 0.13
UBFD1-207ENST00000567212 STK3Q13188 491 aa15.89■□□□□ 0.13
UBFD1-207ENST00000567212 CAGE1Q8TC20 777 aa15.89■□□□□ 0.13
UBFD1-207ENST00000567212 NAP1L1P55209 391 aaKnown RBP15.88■□□□□ 0.13
UBFD1-207ENST00000567212 IRX3P78415 501 aaPredicted RBP15.88■□□□□ 0.13
UBFD1-207ENST00000567212 KLHL40Q2TBA0 621 aa15.88■□□□□ 0.13
UBFD1-207ENST00000567212 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
UBFD1-207ENST00000567212 MCM2P49736 904 aa15.88■□□□□ 0.13
UBFD1-207ENST00000567212 IFIT2P09913 472 aaKnown RBP15.88■□□□□ 0.13
UBFD1-207ENST00000567212 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 HCLS1P14317 486 aaPredicted RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 PDIA4P13667 645 aaKnown RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 ERC2O15083 957 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 SMAP1Q8IYB5 467 aaPredicted RBP15.87■□□□□ 0.13
UBFD1-207ENST00000567212 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
UBFD1-207ENST00000567212 URI1O94763 535 aaPredicted RBP15.86■□□□□ 0.13
UBFD1-207ENST00000567212 SERPINC1P01008 464 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 LARP6Q9BRS8 491 aaKnown RBP15.86■□□□□ 0.13
UBFD1-207ENST00000567212 NUP62CLQ9H1M0 184 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 MAP4K4O95819 1239 aaPredicted RBP15.86■□□□□ 0.13
UBFD1-207ENST00000567212 CKAP2LQ8IYA6 745 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
UBFD1-207ENST00000567212 ERCC4Q92889 916 aaPredicted RBP15.86■□□□□ 0.13
UBFD1-207ENST00000567212 MCM5P33992 734 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 KIF18AQ8NI77 898 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 GCC1Q96CN9 775 aa15.86■□□□□ 0.13
UBFD1-207ENST00000567212 KIAA0754O94854 1291 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 LARP1BQ659C4 914 aaKnown RBP15.85■□□□□ 0.13
UBFD1-207ENST00000567212 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
UBFD1-207ENST00000567212 ATP2B1P20020 1258 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 KIF3BO15066 747 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 GTF2A1P52655 376 aaPredicted RBP15.85■□□□□ 0.13
UBFD1-207ENST00000567212 CCDC191Q8NCU4 936 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 CDR1P51861 262 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 KRT85P78386 507 aa15.85■□□□□ 0.13
UBFD1-207ENST00000567212 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
UBFD1-207ENST00000567212 LMAN1P49257 510 aa15.84■□□□□ 0.13
UBFD1-207ENST00000567212 KANK1Q14678 1352 aa15.84■□□□□ 0.13
UBFD1-207ENST00000567212 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
UBFD1-207ENST00000567212 DNAJC2Q99543 621 aaKnown RBP15.84■□□□□ 0.13
UBFD1-207ENST00000567212 DDX54Q8TDD1 881 aaKnown RBP15.83■□□□□ 0.13
UBFD1-207ENST00000567212 KRT222Q8N1A0 295 aa15.83■□□□□ 0.12
UBFD1-207ENST00000567212 RRBP1Q9P2E9 1410 aaKnown RBP15.83■□□□□ 0.12
UBFD1-207ENST00000567212 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
UBFD1-207ENST00000567212 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
UBFD1-207ENST00000567212 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
UBFD1-207ENST00000567212 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 ME1P48163 572 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 GIMAP7Q8NHV1 300 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 MAP3K11Q16584 847 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 ANKRD20A12PQ8NF67 263 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
UBFD1-207ENST00000567212 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
UBFD1-207ENST00000567212 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
UBFD1-207ENST00000567212 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
UBFD1-207ENST00000567212 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
UBFD1-207ENST00000567212 LRRC9Q6ZRR7 1453 aa15.81■□□□□ 0.12
UBFD1-207ENST00000567212 PDCP20941 246 aa15.81■□□□□ 0.12
UBFD1-207ENST00000567212 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
UBFD1-207ENST00000567212 U2AF2P26368 475 aaKnown RBP eCLIP15.8■□□□□ 0.121e-7■■■□□ 18.5
UBFD1-207ENST00000567212 DUSP27Q5VZP5 1158 aa15.8■□□□□ 0.12
UBFD1-207ENST00000567212 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
UBFD1-207ENST00000567212 ZNF428Q96B54 188 aa15.8■□□□□ 0.12
UBFD1-207ENST00000567212 USP8P40818 1118 aa15.8■□□□□ 0.12
UBFD1-207ENST00000567212 TRIM29Q14134 588 aa15.8■□□□□ 0.12
UBFD1-207ENST00000567212 CPLX2Q6PUV4 134 aaKnown RBP15.8■□□□□ 0.12
UBFD1-207ENST00000567212 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
UBFD1-207ENST00000567212 CCDC183Q5T5S1 534 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms