RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ZNF775Q96BV0 537 aaPredicted RBP7.42□□□□□ -1.22
HERC1-211ENST00000560983 MOXD2PA6NHM9 499 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 NDUFV2P19404 249 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 FAM69CQ0P6D2 419 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 ILDR2Q71H61 639 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 SNIP1Q8TAD8 396 aaKnown RBP7.41□□□□□ -1.22
HERC1-211ENST00000560983 MRGPRX2Q96LB1 330 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 WIZO95785 1651 aa7.41□□□□□ -1.22
HERC1-211ENST00000560983 PTCRAQ6ISU1 281 aaPredicted RBP7.4□□□□□ -1.22
HERC1-211ENST00000560983 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
HERC1-211ENST00000560983 TARBP1Q13395 1621 aaKnown RBP7.4□□□□□ -1.22
HERC1-211ENST00000560983 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 SNAPC4Q5SXM2 1469 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 LMTK3Q96Q04 1460 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 MS4A1P11836 297 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
HERC1-211ENST00000560983 DESI1Q6ICB0 168 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 AK7Q96M32 723 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 BEGAINQ9BUH8 593 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 DACH1Q9UI36 760 aa7.39□□□□□ -1.23
HERC1-211ENST00000560983 RAD54L2Q9Y4B4 1467 aa7.38□□□□□ -1.23
HERC1-211ENST00000560983 TTC24A2A3L6 582 aaPredicted RBP7.38□□□□□ -1.23
HERC1-211ENST00000560983 SPDYE5A6NIY4 337 aa7.38□□□□□ -1.23
HERC1-211ENST00000560983 SIAH2O43255 324 aa7.38□□□□□ -1.23
HERC1-211ENST00000560983 PTPRNQ16849 979 aa7.38□□□□□ -1.23
HERC1-211ENST00000560983 RSBN1LQ6PCB5 846 aaPredicted RBP7.38□□□□□ -1.23
HERC1-211ENST00000560983 TBC1D2Q9BYX2 928 aa7.38□□□□□ -1.23
HERC1-211ENST00000560983 SYNJ1O43426 1573 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 J3QL48 77 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 AXIN1O15169 862 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 SPTLC1O15269 473 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 CCNYL3P0C7X3 344 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 DIXDC1Q155Q3 683 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
HERC1-211ENST00000560983 EVA1BQ9NVM1 165 aa7.37□□□□□ -1.23
HERC1-211ENST00000560983 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
HERC1-211ENST00000560983 SOGA1O94964 1423 aa7.36□□□□□ -1.23
HERC1-211ENST00000560983 MTMR2Q13614 643 aa7.36□□□□□ -1.23
HERC1-211ENST00000560983 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
HERC1-211ENST00000560983 ERCC6L2Q5T890 1561 aa7.36□□□□□ -1.23
HERC1-211ENST00000560983 HECW2Q9P2P5 1572 aa7.35□□□□□ -1.23
HERC1-211ENST00000560983 ABCC10Q5T3U5 1492 aa7.35□□□□□ -1.23
HERC1-211ENST00000560983 SH3BP2P78314 561 aa7.34□□□□□ -1.23
HERC1-211ENST00000560983 KCNH2Q12809 1159 aa7.34□□□□□ -1.23
HERC1-211ENST00000560983 TUSC1Q2TAM9 212 aa7.34□□□□□ -1.23
HERC1-211ENST00000560983 GMPR2Q9P2T1 348 aaKnown RBP7.34□□□□□ -1.23
HERC1-211ENST00000560983 PCDHB15Q9Y5E8 787 aa7.34□□□□□ -1.23
HERC1-211ENST00000560983 SYNJ2O15056 1496 aa7.34□□□□□ -1.23
HERC1-211ENST00000560983 MAGI1Q96QZ7 1491 aaPredicted RBP7.34□□□□□ -1.23
HERC1-211ENST00000560983 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
HERC1-211ENST00000560983 PDE4DQ08499 809 aa7.33□□□□□ -1.24
HERC1-211ENST00000560983 PRPF38BQ5VTL8 546 aaKnown RBP7.33□□□□□ -1.24
HERC1-211ENST00000560983 LYPD8Q6UX82 237 aa7.33□□□□□ -1.24
HERC1-211ENST00000560983 HPS1Q92902 700 aa7.33□□□□□ -1.24
HERC1-211ENST00000560983 UNC93B1Q9H1C4 597 aa7.33□□□□□ -1.24
HERC1-211ENST00000560983 ADGRL1O94910 1474 aa7.32□□□□□ -1.24
HERC1-211ENST00000560983 ATP13A2Q9NQ11 1180 aa7.32□□□□□ -1.24
HERC1-211ENST00000560983 CFAP99D6REC4 459 aa7.31□□□□□ -1.24
HERC1-211ENST00000560983 F12P00748 615 aaPredicted RBP7.31□□□□□ -1.24
HERC1-211ENST00000560983 HRCP23327 699 aa7.31□□□□□ -1.24
HERC1-211ENST00000560983 MPNDQ8N594 471 aa7.31□□□□□ -1.24
HERC1-211ENST00000560983 KIF13AQ9H1H9 1805 aa7.31□□□□□ -1.24
HERC1-211ENST00000560983 GRIN2BQ13224 1484 aa7.3□□□□□ -1.24
HERC1-211ENST00000560983 RIC3Q7Z5B4 369 aa7.3□□□□□ -1.24
HERC1-211ENST00000560983 ZBTB3Q9H5J0 574 aa7.3□□□□□ -1.24
HERC1-211ENST00000560983 SLC24A3Q9HC58 644 aa7.3□□□□□ -1.24
HERC1-211ENST00000560983 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
HERC1-211ENST00000560983 MYSM1Q5VVJ2 828 aa7.29□□□□□ -1.24
HERC1-211ENST00000560983 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
HERC1-211ENST00000560983 ZNF511Q8NB15 262 aa7.29□□□□□ -1.24
HERC1-211ENST00000560983 EHBP1Q8NDI1 1231 aa7.29□□□□□ -1.24
HERC1-211ENST00000560983 LIMD1Q9UGP4 676 aa7.29□□□□□ -1.24
HERC1-211ENST00000560983 TOP2AP11388 1531 aaKnown RBP7.28□□□□□ -1.24
HERC1-211ENST00000560983 ALDH1A1P00352 501 aa7.28□□□□□ -1.24
HERC1-211ENST00000560983 BAP1Q92560 729 aa7.28□□□□□ -1.24
HERC1-211ENST00000560983 TRIM47Q96LD4 638 aa7.28□□□□□ -1.24
HERC1-211ENST00000560983 KDM6BO15054 1643 aa7.27□□□□□ -1.25
HERC1-211ENST00000560983 C11orf95C9JLR9 678 aaPredicted RBP7.27□□□□□ -1.25
HERC1-211ENST00000560983 LILRB3O75022 631 aa7.27□□□□□ -1.25
HERC1-211ENST00000560983 CABLES1Q8TDN4 633 aa7.27□□□□□ -1.25
HERC1-211ENST00000560983 DISP3Q9P2K9 1392 aa7.26□□□□□ -1.25
HERC1-211ENST00000560983 VARSP26640 1264 aaKnown RBP7.26□□□□□ -1.25
HERC1-211ENST00000560983 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
HERC1-211ENST00000560983 CEP170Q5SW79 1584 aa7.25□□□□□ -1.25
HERC1-211ENST00000560983 NFX1Q12986 1120 aaKnown RBP7.25□□□□□ -1.25
HERC1-211ENST00000560983 QPCTQ16769 361 aa7.25□□□□□ -1.25
HERC1-211ENST00000560983 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
HERC1-211ENST00000560983 PER1O15534 1290 aaPredicted RBP7.24□□□□□ -1.25
HERC1-211ENST00000560983 SNRPBP14678 240 aaKnown RBP7.24□□□□□ -1.25
HERC1-211ENST00000560983 KIFC2Q96AC6 838 aa7.24□□□□□ -1.25
HERC1-211ENST00000560983 MAP10Q9P2G4 905 aa7.24□□□□□ -1.25
HERC1-211ENST00000560983 TLL2Q9Y6L7 1015 aa7.24□□□□□ -1.25
HERC1-211ENST00000560983 NUP160Q12769 1436 aa7.24□□□□□ -1.25
HERC1-211ENST00000560983 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
HERC1-211ENST00000560983 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
HERC1-211ENST00000560983 CDK15Q96Q40 435 aa7.23□□□□□ -1.25
HERC1-211ENST00000560983 DIP2BQ9P265 1576 aa7.23□□□□□ -1.25
HERC1-211ENST00000560983 FGD5Q6ZNL6 1462 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms