RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 POTECB2RU33 542 aa9.18□□□□□ -0.94
USP3-215ENST00000559771 FOXK1P85037 733 aa9.18□□□□□ -0.94
USP3-215ENST00000559771 PLPP6Q8IY26 295 aa9.18□□□□□ -0.94
USP3-215ENST00000559771 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
USP3-215ENST00000559771 ARHGAP23Q9P227 1491 aa9.18□□□□□ -0.94
USP3-215ENST00000559771 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 DAPK1P53355 1430 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 ARHGAP31Q2M1Z3 1444 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 KIF15Q9NS87 1388 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 HSPA1LP34931 641 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
USP3-215ENST00000559771 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
USP3-215ENST00000559771 SLIT1O75093 1534 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 PPP1R37O75864 691 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 PTPREP23469 700 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 XIRP1Q702N8 1843 aaKnown RBP9.16□□□□□ -0.94
USP3-215ENST00000559771 PIK3C2BO00750 1634 aa9.16□□□□□ -0.94
USP3-215ENST00000559771 SOWAHBA6NEL2 793 aa9.15□□□□□ -0.94
USP3-215ENST00000559771 LTKP29376 864 aa9.15□□□□□ -0.94
USP3-215ENST00000559771 FOSBP53539 338 aa9.15□□□□□ -0.94
USP3-215ENST00000559771 RRP7BPQ9NSQ0 103 aa9.15□□□□□ -0.94
USP3-215ENST00000559771 SYNMO15061 1565 aa9.15□□□□□ -0.95
USP3-215ENST00000559771 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.95
USP3-215ENST00000559771 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
USP3-215ENST00000559771 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
USP3-215ENST00000559771 LMTK2Q8IWU2 1503 aa9.14□□□□□ -0.95
USP3-215ENST00000559771 SCAF11Q99590 1463 aaKnown RBP9.14□□□□□ -0.95
USP3-215ENST00000559771 KDM5AP29375 1690 aaKnown RBP9.13□□□□□ -0.95
USP3-215ENST00000559771 TBC1D12O60347 775 aa9.13□□□□□ -0.95
USP3-215ENST00000559771 TOM1O60784 492 aa9.13□□□□□ -0.95
USP3-215ENST00000559771 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
USP3-215ENST00000559771 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
USP3-215ENST00000559771 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 TET3O43151 1660 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 DSG2Q14126 1118 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 NOS1P29475 1434 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
USP3-215ENST00000559771 IDI1Q13907 227 aa9.1□□□□□ -0.95
USP3-215ENST00000559771 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
USP3-215ENST00000559771 OXER1Q8TDS5 423 aa9.1□□□□□ -0.95
USP3-215ENST00000559771 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
USP3-215ENST00000559771 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
USP3-215ENST00000559771 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
USP3-215ENST00000559771 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
USP3-215ENST00000559771 V9GY48 417 aaPredicted RBP9.09□□□□□ -0.95
USP3-215ENST00000559771 MYO5BQ9ULV0 1848 aa9.08□□□□□ -0.96
USP3-215ENST00000559771 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
USP3-215ENST00000559771 ADGRB3O60242 1522 aa9.07□□□□□ -0.96
USP3-215ENST00000559771 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
USP3-215ENST00000559771 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
USP3-215ENST00000559771 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
USP3-215ENST00000559771 KANK1Q14678 1352 aa9.06□□□□□ -0.96
USP3-215ENST00000559771 UNC13BO14795 1591 aa9.06□□□□□ -0.96
USP3-215ENST00000559771 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
USP3-215ENST00000559771 ZFYVE9O95405 1425 aa9.05□□□□□ -0.96
USP3-215ENST00000559771 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
USP3-215ENST00000559771 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
USP3-215ENST00000559771 TMEM131LA2VDJ0 1609 aa9.05□□□□□ -0.96
USP3-215ENST00000559771 E9PCH4 1651 aa9.04□□□□□ -0.96
USP3-215ENST00000559771 RPRD2Q5VT52 1461 aaKnown RBP9.04□□□□□ -0.96
USP3-215ENST00000559771 TMEM94Q12767 1356 aa9.04□□□□□ -0.96
USP3-215ENST00000559771 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
USP3-215ENST00000559771 SLC26A8Q96RN1 970 aa9.04□□□□□ -0.96
USP3-215ENST00000559771 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
USP3-215ENST00000559771 KCNA6P17658 529 aa9.03□□□□□ -0.96
USP3-215ENST00000559771 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
USP3-215ENST00000559771 ANO8Q9HCE9 1232 aaPredicted RBP9.03□□□□□ -0.96
USP3-215ENST00000559771 RGS17Q9UGC6 210 aaPredicted RBP9.03□□□□□ -0.96
USP3-215ENST00000559771 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
USP3-215ENST00000559771 CHD2O14647 1828 aaKnown RBP9.03□□□□□ -0.96
USP3-215ENST00000559771 ROBO1Q9Y6N7 1651 aa9.02□□□□□ -0.97
USP3-215ENST00000559771 FAM50AQ14320 339 aaKnown RBP9.02□□□□□ -0.97
USP3-215ENST00000559771 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
USP3-215ENST00000559771 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
USP3-215ENST00000559771 SLC52A1Q9NWF4 448 aa9.02□□□□□ -0.97
USP3-215ENST00000559771 NKTRP30414 1462 aaKnown RBP9.02□□□□□ -0.97
USP3-215ENST00000559771 IQGAP3Q86VI3 1631 aa9.02□□□□□ -0.97
USP3-215ENST00000559771 MYT1Q01538 1121 aa9.01□□□□□ -0.97
USP3-215ENST00000559771 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
USP3-215ENST00000559771 PLEKHG1Q9ULL1 1385 aa9□□□□□ -0.97
USP3-215ENST00000559771 RIMS2Q9UQ26 1411 aa9□□□□□ -0.97
USP3-215ENST00000559771 COL9A1P20849 921 aa9□□□□□ -0.97
USP3-215ENST00000559771 ZDHHC16Q969W1 377 aa9□□□□□ -0.97
USP3-215ENST00000559771 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
USP3-215ENST00000559771 ADAMTS13Q76LX8 1427 aa8.99□□□□□ -0.97
USP3-215ENST00000559771 TRIM67Q6ZTA4 783 aa8.99□□□□□ -0.97
USP3-215ENST00000559771 PROSER2Q86WR7 435 aaPredicted RBP8.99□□□□□ -0.97
USP3-215ENST00000559771 UPF1Q92900 1129 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP3-215ENST00000559771 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
USP3-215ENST00000559771 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
USP3-215ENST00000559771 NRXN3Q9Y4C0 1643 aa8.97□□□□□ -0.97
USP3-215ENST00000559771 COL16A1Q07092 1604 aaPredicted RBP8.96□□□□□ -0.98
USP3-215ENST00000559771 TBX22Q9Y458 520 aa8.96□□□□□ -0.98
USP3-215ENST00000559771 PHLPP1O60346 1717 aa8.96□□□□□ -0.98
USP3-215ENST00000559771 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.96□□□□□ -0.98
USP3-215ENST00000559771 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms