RNA–Protein interactions for RNA: ENST00000558548.5

MRPS11-205, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 3

Gene MRPS11, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-205ENST00000558548 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
MRPS11-205ENST00000558548 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
MRPS11-205ENST00000558548 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
MRPS11-205ENST00000558548 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
MRPS11-205ENST00000558548 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
MRPS11-205ENST00000558548 SYCP2Q9BX26 1530 aa12.64□□□□□ -0.39
MRPS11-205ENST00000558548 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
MRPS11-205ENST00000558548 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
MRPS11-205ENST00000558548 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
MRPS11-205ENST00000558548 LAMC1P11047 1609 aa12.63□□□□□ -0.39
MRPS11-205ENST00000558548 HRO43593 1189 aa12.63□□□□□ -0.39
MRPS11-205ENST00000558548 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
MRPS11-205ENST00000558548 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
MRPS11-205ENST00000558548 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
MRPS11-205ENST00000558548 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
MRPS11-205ENST00000558548 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
MRPS11-205ENST00000558548 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
MRPS11-205ENST00000558548 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
MRPS11-205ENST00000558548 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
MRPS11-205ENST00000558548 NPDC1Q9NQX5 325 aaPredicted RBP12.61□□□□□ -0.39
MRPS11-205ENST00000558548 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
MRPS11-205ENST00000558548 RIMS1Q86UR5 1692 aaKnown RBP12.6□□□□□ -0.39
MRPS11-205ENST00000558548 TRIM6-TRIM34B2RNG4 842 aa12.59□□□□□ -0.39
MRPS11-205ENST00000558548 PRSS12P56730 875 aa12.59□□□□□ -0.39
MRPS11-205ENST00000558548 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
MRPS11-205ENST00000558548 CDCA7LQ96GN5 454 aa12.59□□□□□ -0.39
MRPS11-205ENST00000558548 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
MRPS11-205ENST00000558548 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
MRPS11-205ENST00000558548 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
MRPS11-205ENST00000558548 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
MRPS11-205ENST00000558548 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
MRPS11-205ENST00000558548 INO80Q9ULG1 1556 aaPredicted RBP12.58□□□□□ -0.4
MRPS11-205ENST00000558548 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
MRPS11-205ENST00000558548 NUP155O75694 1391 aa12.57□□□□□ -0.4
MRPS11-205ENST00000558548 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
MRPS11-205ENST00000558548 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
MRPS11-205ENST00000558548 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
MRPS11-205ENST00000558548 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
MRPS11-205ENST00000558548 PTGDRQ13258 359 aa12.56□□□□□ -0.4
MRPS11-205ENST00000558548 KDM5CP41229 1560 aa12.56□□□□□ -0.4
MRPS11-205ENST00000558548 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
MRPS11-205ENST00000558548 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
MRPS11-205ENST00000558548 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
MRPS11-205ENST00000558548 ANP32CO43423 234 aa12.54□□□□□ -0.4
MRPS11-205ENST00000558548 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
MRPS11-205ENST00000558548 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
MRPS11-205ENST00000558548 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
MRPS11-205ENST00000558548 ZNF777Q9ULD5 760 aaPredicted RBP12.53□□□□□ -0.4
MRPS11-205ENST00000558548 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
MRPS11-205ENST00000558548 TET3O43151 1660 aa12.52□□□□□ -0.4
MRPS11-205ENST00000558548 FCHSD2O94868 740 aa12.52□□□□□ -0.41
MRPS11-205ENST00000558548 MLECQ14165 292 aa12.52□□□□□ -0.41
MRPS11-205ENST00000558548 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
MRPS11-205ENST00000558548 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
MRPS11-205ENST00000558548 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
MRPS11-205ENST00000558548 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
MRPS11-205ENST00000558548 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
MRPS11-205ENST00000558548 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
MRPS11-205ENST00000558548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
MRPS11-205ENST00000558548 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
MRPS11-205ENST00000558548 TRPM2O94759 1503 aa12.5□□□□□ -0.41
MRPS11-205ENST00000558548 ATP7AQ04656 1500 aa12.5□□□□□ -0.41
MRPS11-205ENST00000558548 LMTK2Q8IWU2 1503 aa12.5□□□□□ -0.41
MRPS11-205ENST00000558548 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
MRPS11-205ENST00000558548 FANCAO15360 1455 aa12.49□□□□□ -0.41
MRPS11-205ENST00000558548 PTPRTO14522 1441 aa12.49□□□□□ -0.41
MRPS11-205ENST00000558548 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
MRPS11-205ENST00000558548 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
MRPS11-205ENST00000558548 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.41
MRPS11-205ENST00000558548 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
MRPS11-205ENST00000558548 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
MRPS11-205ENST00000558548 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
MRPS11-205ENST00000558548 SMAPO00193 183 aa12.48□□□□□ -0.41
MRPS11-205ENST00000558548 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
MRPS11-205ENST00000558548 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
MRPS11-205ENST00000558548 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
MRPS11-205ENST00000558548 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
MRPS11-205ENST00000558548 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 TATDN2Q93075 761 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 PNMA3Q9UL41 463 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 CEP152O94986 1710 aa12.47□□□□□ -0.41
MRPS11-205ENST00000558548 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 NEO1Q92859 1461 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 PRAG1Q86YV5 1406 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
MRPS11-205ENST00000558548 FRMPD1Q5SYB0 1578 aa12.46□□□□□ -0.42
MRPS11-205ENST00000558548 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.42
MRPS11-205ENST00000558548 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 USP47Q96K76 1375 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 HIC1Q14526 733 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
MRPS11-205ENST00000558548 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms