RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
ZEB1-211ENST00000558440 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
ZEB1-211ENST00000558440 MAGI3Q5TCQ9 1506 aa10.36□□□□□ -0.75
ZEB1-211ENST00000558440 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
ZEB1-211ENST00000558440 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
ZEB1-211ENST00000558440 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-211ENST00000558440 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-211ENST00000558440 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-211ENST00000558440 KDM4AO75164 1064 aa10.34□□□□□ -0.75
ZEB1-211ENST00000558440 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
ZEB1-211ENST00000558440 ABCA8O94911 1581 aa10.34□□□□□ -0.75
ZEB1-211ENST00000558440 SLC19A1P41440 591 aa10.33□□□□□ -0.76
ZEB1-211ENST00000558440 BRICD5Q6PL45 260 aa10.32□□□□□ -0.76
ZEB1-211ENST00000558440 USP46P62068 366 aa10.31□□□□□ -0.76
ZEB1-211ENST00000558440 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
ZEB1-211ENST00000558440 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
ZEB1-211ENST00000558440 AMHR2Q16671 573 aa10.3□□□□□ -0.76
ZEB1-211ENST00000558440 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
ZEB1-211ENST00000558440 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
ZEB1-211ENST00000558440 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
ZEB1-211ENST00000558440 Q3C1V9 767 aa10.29□□□□□ -0.76
ZEB1-211ENST00000558440 MSS51Q4VC12 460 aa10.29□□□□□ -0.76
ZEB1-211ENST00000558440 SPRYD7Q5W111 196 aa10.29□□□□□ -0.76
ZEB1-211ENST00000558440 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
ZEB1-211ENST00000558440 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
ZEB1-211ENST00000558440 ARAP3Q8WWN8 1544 aa10.28□□□□□ -0.76
ZEB1-211ENST00000558440 HOXA2O43364 376 aa10.28□□□□□ -0.76
ZEB1-211ENST00000558440 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.77
ZEB1-211ENST00000558440 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
ZEB1-211ENST00000558440 ADAMTSL3P82987 1691 aa10.27□□□□□ -0.77
ZEB1-211ENST00000558440 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
ZEB1-211ENST00000558440 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
ZEB1-211ENST00000558440 HLA-CQ95604 372 aa10.26□□□□□ -0.77
ZEB1-211ENST00000558440 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
ZEB1-211ENST00000558440 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
ZEB1-211ENST00000558440 BCORL1Q5H9F3 1711 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 TRIM67Q6ZTA4 783 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 FBXO41Q8TF61 875 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 ZNF775Q96BV0 537 aaPredicted RBP10.24□□□□□ -0.77
ZEB1-211ENST00000558440 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
ZEB1-211ENST00000558440 PTPRMP28827 1452 aa10.23□□□□□ -0.77
ZEB1-211ENST00000558440 RAPGEF6Q8TEU7 1601 aa10.23□□□□□ -0.77
ZEB1-211ENST00000558440 ZNF697Q5TEC3 545 aa10.23□□□□□ -0.77
ZEB1-211ENST00000558440 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
ZEB1-211ENST00000558440 ATP10BO94823 1461 aa10.23□□□□□ -0.77
ZEB1-211ENST00000558440 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
ZEB1-211ENST00000558440 MADDQ8WXG6 1647 aa10.22□□□□□ -0.77
ZEB1-211ENST00000558440 TRIM66O15016 1216 aa10.22□□□□□ -0.77
ZEB1-211ENST00000558440 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
ZEB1-211ENST00000558440 AK7Q96M32 723 aa10.22□□□□□ -0.77
ZEB1-211ENST00000558440 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
ZEB1-211ENST00000558440 NEO1Q92859 1461 aa10.22□□□□□ -0.77
ZEB1-211ENST00000558440 RPIAP49247 311 aa10.21□□□□□ -0.77
ZEB1-211ENST00000558440 MMP16P51512 607 aa10.21□□□□□ -0.77
ZEB1-211ENST00000558440 SAMD9Q5K651 1589 aa10.21□□□□□ -0.78
ZEB1-211ENST00000558440 RIMS1Q86UR5 1692 aaKnown RBP10.21□□□□□ -0.78
ZEB1-211ENST00000558440 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
ZEB1-211ENST00000558440 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PRR20EP86478 221 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PRR20CP86479 221 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PRR20DP86480 221 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PRR20BP86481 221 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PRR20AP86496 221 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 ARID4BQ4LE39 1312 aaPredicted RBP10.2□□□□□ -0.78
ZEB1-211ENST00000558440 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
ZEB1-211ENST00000558440 FRMPD1Q5SYB0 1578 aa10.19□□□□□ -0.78
ZEB1-211ENST00000558440 SPIRE2Q8WWL2 714 aa10.19□□□□□ -0.78
ZEB1-211ENST00000558440 RICTORQ6R327 1708 aa10.19□□□□□ -0.78
ZEB1-211ENST00000558440 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
ZEB1-211ENST00000558440 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
ZEB1-211ENST00000558440 ARHGEF40Q8TER5 1519 aa10.17□□□□□ -0.78
ZEB1-211ENST00000558440 GDF9O60383 454 aa10.17□□□□□ -0.78
ZEB1-211ENST00000558440 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
ZEB1-211ENST00000558440 FDX1P10109 184 aa10.16□□□□□ -0.78
ZEB1-211ENST00000558440 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
ZEB1-211ENST00000558440 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
ZEB1-211ENST00000558440 LMTK3Q96Q04 1460 aa10.16□□□□□ -0.78
ZEB1-211ENST00000558440 TNFRSF10AO00220 468 aa10.15□□□□□ -0.78
ZEB1-211ENST00000558440 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
ZEB1-211ENST00000558440 PCDHGC3Q9UN70 934 aa10.15□□□□□ -0.78
ZEB1-211ENST00000558440 FER1L4A9Z1Z3 1794 aa10.14□□□□□ -0.79
ZEB1-211ENST00000558440 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
ZEB1-211ENST00000558440 CD2BP2O95400 341 aaKnown RBP10.14□□□□□ -0.79
ZEB1-211ENST00000558440 MS4A1P11836 297 aa10.14□□□□□ -0.79
ZEB1-211ENST00000558440 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
ZEB1-211ENST00000558440 DENND4BO75064 1496 aaPredicted RBP10.14□□□□□ -0.79
ZEB1-211ENST00000558440 NUP153P49790 1475 aaKnown RBP10.14□□□□□ -0.79
ZEB1-211ENST00000558440 FANCAO15360 1455 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
ZEB1-211ENST00000558440 JUNDP17535 347 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 NDUFV2P19404 249 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 PDE4DQ08499 809 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 POGZQ7Z3K3 1410 aa10.13□□□□□ -0.79
ZEB1-211ENST00000558440 PKDCCQ504Y2 493 aa10.12□□□□□ -0.79
ZEB1-211ENST00000558440 BCANQ96GW7 911 aa10.12□□□□□ -0.79
ZEB1-211ENST00000558440 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
ZEB1-211ENST00000558440 PLEKHD1A6NEE1 506 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms