RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
LETMD1-209ENST00000547318 BECN1Q14457 450 aa18.66■□□□□ 0.58
LETMD1-209ENST00000547318 UPF2Q9HAU5 1272 aaKnown RBP18.66■□□□□ 0.58
LETMD1-209ENST00000547318 FYB1O15117 783 aa18.65■□□□□ 0.58
LETMD1-209ENST00000547318 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
LETMD1-209ENST00000547318 PRAM1Q96QH2 718 aa18.64■□□□□ 0.58
LETMD1-209ENST00000547318 SETD1AO15047 1707 aaKnown RBP18.64■□□□□ 0.58
LETMD1-209ENST00000547318 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
LETMD1-209ENST00000547318 PPIP5K1Q6PFW1 1433 aa18.64■□□□□ 0.57
LETMD1-209ENST00000547318 DIAPH1O60610 1272 aaKnown RBP18.63■□□□□ 0.57
LETMD1-209ENST00000547318 DDX19BQ9UMR2 479 aa18.63■□□□□ 0.57
LETMD1-209ENST00000547318 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
LETMD1-209ENST00000547318 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
LETMD1-209ENST00000547318 DIP2BQ9P265 1576 aa18.62■□□□□ 0.57
LETMD1-209ENST00000547318 FCHSD2O94868 740 aa18.62■□□□□ 0.57
LETMD1-209ENST00000547318 RLBP1P12271 317 aa18.62■□□□□ 0.57
LETMD1-209ENST00000547318 HDAC1Q13547 482 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-209ENST00000547318 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
LETMD1-209ENST00000547318 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
LETMD1-209ENST00000547318 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
LETMD1-209ENST00000547318 STK26Q9P289 416 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 A2ML1A8K2U0 1454 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 USP19O94966 1318 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
LETMD1-209ENST00000547318 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
LETMD1-209ENST00000547318 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
LETMD1-209ENST00000547318 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
LETMD1-209ENST00000547318 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
LETMD1-209ENST00000547318 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
LETMD1-209ENST00000547318 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
LETMD1-209ENST00000547318 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-209ENST00000547318 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
LETMD1-209ENST00000547318 SMC4Q9NTJ3 1288 aa18.59■□□□□ 0.57
LETMD1-209ENST00000547318 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
LETMD1-209ENST00000547318 CDK19Q9BWU1 502 aa18.59■□□□□ 0.57
LETMD1-209ENST00000547318 PDZRN3Q9UPQ7 1066 aa18.59■□□□□ 0.57
LETMD1-209ENST00000547318 ATF7IPQ6VMQ6 1270 aa18.58■□□□□ 0.56
LETMD1-209ENST00000547318 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
LETMD1-209ENST00000547318 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
LETMD1-209ENST00000547318 RIMS2Q9UQ26 1411 aa18.57■□□□□ 0.56
LETMD1-209ENST00000547318 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
LETMD1-209ENST00000547318 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
LETMD1-209ENST00000547318 GSE1Q14687 1217 aa18.57■□□□□ 0.56
LETMD1-209ENST00000547318 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
LETMD1-209ENST00000547318 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
LETMD1-209ENST00000547318 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
LETMD1-209ENST00000547318 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.56■□□□□ 0.56
LETMD1-209ENST00000547318 AATKQ6ZMQ8 1374 aa18.56■□□□□ 0.56
LETMD1-209ENST00000547318 RIPK4P57078 832 aa18.56■□□□□ 0.56
LETMD1-209ENST00000547318 TBC1D32Q96NH3 1257 aa18.55■□□□□ 0.56
LETMD1-209ENST00000547318 CPSF1Q10570 1443 aaKnown RBP18.55■□□□□ 0.56
LETMD1-209ENST00000547318 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
LETMD1-209ENST00000547318 TRIM27P14373 513 aa18.54■□□□□ 0.56
LETMD1-209ENST00000547318 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
LETMD1-209ENST00000547318 TECPR2O15040 1411 aa18.53■□□□□ 0.56
LETMD1-209ENST00000547318 MON2Q7Z3U7 1717 aa18.53■□□□□ 0.56
LETMD1-209ENST00000547318 SMC5Q8IY18 1101 aa18.52■□□□□ 0.56
LETMD1-209ENST00000547318 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
LETMD1-209ENST00000547318 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
LETMD1-209ENST00000547318 ARHGAP45Q92619 1136 aa18.52■□□□□ 0.55
LETMD1-209ENST00000547318 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
LETMD1-209ENST00000547318 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
LETMD1-209ENST00000547318 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
LETMD1-209ENST00000547318 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
LETMD1-209ENST00000547318 RSPH6AQ9H0K4 717 aa18.51■□□□□ 0.55
LETMD1-209ENST00000547318 CPS1P31327 1500 aa18.51■□□□□ 0.55
LETMD1-209ENST00000547318 FBXO31Q5XUX0 539 aaPredicted RBP18.5■□□□□ 0.55
LETMD1-209ENST00000547318 TNNQ9UQP3 1299 aa18.5■□□□□ 0.55
LETMD1-209ENST00000547318 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 ZBTB40Q9NUA8 1239 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 NFE2L2Q16236 605 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
LETMD1-209ENST00000547318 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
LETMD1-209ENST00000547318 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
LETMD1-209ENST00000547318 PTCH1Q13635 1447 aa18.48■□□□□ 0.55
LETMD1-209ENST00000547318 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
LETMD1-209ENST00000547318 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
LETMD1-209ENST00000547318 EIF5BO60841 1220 aaKnown RBP18.47■□□□□ 0.55
LETMD1-209ENST00000547318 SEC24BO95487 1268 aa18.47■□□□□ 0.55
LETMD1-209ENST00000547318 GNAI1P63096 354 aa18.47■□□□□ 0.55
LETMD1-209ENST00000547318 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-209ENST00000547318 C3P01024 1663 aa18.46■□□□□ 0.55
LETMD1-209ENST00000547318 NRKQ7Z2Y5 1582 aa18.46■□□□□ 0.55
LETMD1-209ENST00000547318 KIF24Q5T7B8 1368 aa18.46■□□□□ 0.54
LETMD1-209ENST00000547318 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
LETMD1-209ENST00000547318 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
LETMD1-209ENST00000547318 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-209ENST00000547318 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
LETMD1-209ENST00000547318 ZNF692Q9BU19 519 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-209ENST00000547318 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
LETMD1-209ENST00000547318 NUCB1Q02818 461 aa18.42■□□□□ 0.54
LETMD1-209ENST00000547318 IL13P35225 146 aa18.42■□□□□ 0.54
LETMD1-209ENST00000547318 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
LETMD1-209ENST00000547318 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
LETMD1-209ENST00000547318 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms