RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
UBC-213ENST00000546120 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
UBC-213ENST00000546120 NUCB1Q02818 461 aa12.53□□□□□ -0.4
UBC-213ENST00000546120 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
UBC-213ENST00000546120 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
UBC-213ENST00000546120 CFAP53Q96M91 514 aa12.53□□□□□ -0.4
UBC-213ENST00000546120 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
UBC-213ENST00000546120 DISP1Q96F81 1524 aa12.52□□□□□ -0.4
UBC-213ENST00000546120 MCM2P49736 904 aa12.52□□□□□ -0.41
UBC-213ENST00000546120 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
UBC-213ENST00000546120 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
UBC-213ENST00000546120 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
UBC-213ENST00000546120 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
UBC-213ENST00000546120 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
UBC-213ENST00000546120 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
UBC-213ENST00000546120 GABPB1Q06547 395 aaPredicted RBP12.5□□□□□ -0.41
UBC-213ENST00000546120 SLC20A2Q08357 652 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 PDE4CQ08493 712 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 KIF3AQ9Y496 699 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 NSD2O96028 1365 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 TTC37Q6PGP7 1564 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
UBC-213ENST00000546120 IQGAP3Q86VI3 1631 aa12.49□□□□□ -0.41
UBC-213ENST00000546120 CCDC66A2RUB6 948 aa12.49□□□□□ -0.41
UBC-213ENST00000546120 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
UBC-213ENST00000546120 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
UBC-213ENST00000546120 ARXQ96QS3 562 aa12.49□□□□□ -0.41
UBC-213ENST00000546120 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
UBC-213ENST00000546120 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
UBC-213ENST00000546120 ST18O60284 1047 aa12.48□□□□□ -0.41
UBC-213ENST00000546120 PIBF1Q8WXW3 757 aa12.48□□□□□ -0.41
UBC-213ENST00000546120 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBC-213ENST00000546120 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
UBC-213ENST00000546120 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
UBC-213ENST00000546120 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
UBC-213ENST00000546120 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
UBC-213ENST00000546120 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
UBC-213ENST00000546120 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
UBC-213ENST00000546120 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 CDC45O75419 566 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
UBC-213ENST00000546120 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 OGFRQ9NZT2 677 aa12.46□□□□□ -0.41
UBC-213ENST00000546120 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
UBC-213ENST00000546120 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
UBC-213ENST00000546120 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
UBC-213ENST00000546120 PTMAP06454 111 aaKnown RBP12.45□□□□□ -0.42
UBC-213ENST00000546120 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
UBC-213ENST00000546120 ZBTB40Q9NUA8 1239 aa12.45□□□□□ -0.42
UBC-213ENST00000546120 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
UBC-213ENST00000546120 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
UBC-213ENST00000546120 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
UBC-213ENST00000546120 MYOM2P54296 1465 aa12.44□□□□□ -0.42
UBC-213ENST00000546120 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
UBC-213ENST00000546120 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
UBC-213ENST00000546120 KIF2CQ99661 725 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 RBSNQ9H1K0 784 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
UBC-213ENST00000546120 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
UBC-213ENST00000546120 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
UBC-213ENST00000546120 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.424e-29■■□□□ 13.6
UBC-213ENST00000546120 DNTTIP2Q5QJE6 756 aaKnown RBP12.42□□□□□ -0.42
UBC-213ENST00000546120 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
UBC-213ENST00000546120 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
UBC-213ENST00000546120 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
UBC-213ENST00000546120 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
UBC-213ENST00000546120 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
UBC-213ENST00000546120 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
UBC-213ENST00000546120 REC8O95072 547 aa12.4□□□□□ -0.42
UBC-213ENST00000546120 RLBP1P12271 317 aa12.4□□□□□ -0.42
UBC-213ENST00000546120 SSFA2P28290 1259 aa12.4□□□□□ -0.42
UBC-213ENST00000546120 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
UBC-213ENST00000546120 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
UBC-213ENST00000546120 INTS3Q68E01 1043 aaKnown RBP12.4□□□□□ -0.42
UBC-213ENST00000546120 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
UBC-213ENST00000546120 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
UBC-213ENST00000546120 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
UBC-213ENST00000546120 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
UBC-213ENST00000546120 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
UBC-213ENST00000546120 CLTCL1P53675 1640 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
UBC-213ENST00000546120 PTPRTO14522 1441 aa12.38□□□□□ -0.43
UBC-213ENST00000546120 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
UBC-213ENST00000546120 MORC1Q86VD1 984 aa12.38□□□□□ -0.43
UBC-213ENST00000546120 SMC4Q9NTJ3 1288 aa12.38□□□□□ -0.43
UBC-213ENST00000546120 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
UBC-213ENST00000546120 PAXBP1Q9Y5B6 917 aa12.38□□□□□ -0.43
UBC-213ENST00000546120 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms