RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.83
SNRNP70-203ENST00000544278 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
SNRNP70-203ENST00000544278 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
SNRNP70-203ENST00000544278 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
SNRNP70-203ENST00000544278 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
SNRNP70-203ENST00000544278 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
SNRNP70-203ENST00000544278 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
SNRNP70-203ENST00000544278 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
SNRNP70-203ENST00000544278 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
SNRNP70-203ENST00000544278 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
SNRNP70-203ENST00000544278 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
SNRNP70-203ENST00000544278 NOB1Q9ULX3 412 aaKnown RBP20.23■□□□□ 0.83
SNRNP70-203ENST00000544278 RICTORQ6R327 1708 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 CFAP74Q9C0B2 1584 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 METP08581 1390 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 PTPRMP28827 1452 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
SNRNP70-203ENST00000544278 ABCC11Q96J66 1382 aa20.21■□□□□ 0.83
SNRNP70-203ENST00000544278 TRIM27P14373 513 aa20.21■□□□□ 0.83
SNRNP70-203ENST00000544278 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
SNRNP70-203ENST00000544278 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
SNRNP70-203ENST00000544278 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
SNRNP70-203ENST00000544278 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
SNRNP70-203ENST00000544278 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
SNRNP70-203ENST00000544278 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
SNRNP70-203ENST00000544278 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
SNRNP70-203ENST00000544278 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
SNRNP70-203ENST00000544278 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
SNRNP70-203ENST00000544278 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
SNRNP70-203ENST00000544278 SLKQ9H2G2 1235 aaPredicted RBP20.17■□□□□ 0.82
SNRNP70-203ENST00000544278 NUDT16Q96DE0 195 aaKnown RBP20.17■□□□□ 0.82
SNRNP70-203ENST00000544278 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
SNRNP70-203ENST00000544278 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
SNRNP70-203ENST00000544278 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
SNRNP70-203ENST00000544278 IQSEC2Q5JU85 1478 aa20.16■□□□□ 0.82
SNRNP70-203ENST00000544278 KRT24Q2M2I5 525 aa20.16■□□□□ 0.82
SNRNP70-203ENST00000544278 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 TMEM131LA2VDJ0 1609 aa20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 ALKQ9UM73 1620 aa20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 NUTM2GQ5VZR2 741 aa20.15■□□□□ 0.82
SNRNP70-203ENST00000544278 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.82
SNRNP70-203ENST00000544278 WASLO00401 505 aaPredicted RBP20.14■□□□□ 0.81
SNRNP70-203ENST00000544278 ZMYM3Q14202 1370 aa20.11■□□□□ 0.81
SNRNP70-203ENST00000544278 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
SNRNP70-203ENST00000544278 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
SNRNP70-203ENST00000544278 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
SNRNP70-203ENST00000544278 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
SNRNP70-203ENST00000544278 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 LTKP29376 864 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
SNRNP70-203ENST00000544278 ATF7IPQ6VMQ6 1270 aa20.09■□□□□ 0.81
SNRNP70-203ENST00000544278 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
SNRNP70-203ENST00000544278 USP19O94966 1318 aa20.09■□□□□ 0.81
SNRNP70-203ENST00000544278 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
SNRNP70-203ENST00000544278 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.81
SNRNP70-203ENST00000544278 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
SNRNP70-203ENST00000544278 NFKBIBQ15653 356 aa20.08■□□□□ 0.81
SNRNP70-203ENST00000544278 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.81
SNRNP70-203ENST00000544278 COG3Q96JB2 828 aa20.08■□□□□ 0.81
SNRNP70-203ENST00000544278 ARXQ96QS3 562 aa20.08■□□□□ 0.8
SNRNP70-203ENST00000544278 NSD2O96028 1365 aa20.08■□□□□ 0.8
SNRNP70-203ENST00000544278 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
SNRNP70-203ENST00000544278 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
SNRNP70-203ENST00000544278 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
SNRNP70-203ENST00000544278 APBB1O00213 710 aa20.06■□□□□ 0.8
SNRNP70-203ENST00000544278 MCM10Q7L590 875 aa20.06■□□□□ 0.8
SNRNP70-203ENST00000544278 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
SNRNP70-203ENST00000544278 HSP90AB2PQ58FF8 381 aa20.05■□□□□ 0.8
SNRNP70-203ENST00000544278 C8orf58Q8NAV2 365 aa20.05■□□□□ 0.8
SNRNP70-203ENST00000544278 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
SNRNP70-203ENST00000544278 PUS7Q96PZ0 661 aaKnown RBP20.05■□□□□ 0.8
SNRNP70-203ENST00000544278 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
SNRNP70-203ENST00000544278 MBIPQ9NS73 344 aa20.04■□□□□ 0.8
SNRNP70-203ENST00000544278 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
SNRNP70-203ENST00000544278 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
SNRNP70-203ENST00000544278 FCHSD2O94868 740 aa20.03■□□□□ 0.8
SNRNP70-203ENST00000544278 UBE2Q2Q8WVN8 375 aa20.03■□□□□ 0.8
SNRNP70-203ENST00000544278 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
SNRNP70-203ENST00000544278 IL13P35225 146 aa20.03■□□□□ 0.8
SNRNP70-203ENST00000544278 FOXO3O43524 673 aa20.02■□□□□ 0.8
SNRNP70-203ENST00000544278 ROBO2Q9HCK4 1378 aa20.02■□□□□ 0.8
SNRNP70-203ENST00000544278 NFE2L2Q16236 605 aa20.02■□□□□ 0.79
SNRNP70-203ENST00000544278 C14orf37Q86TY3 774 aa20.02■□□□□ 0.79
SNRNP70-203ENST00000544278 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.79
SNRNP70-203ENST00000544278 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
SNRNP70-203ENST00000544278 ACEP12821 1306 aa20■□□□□ 0.79
SNRNP70-203ENST00000544278 CPS1P31327 1500 aa20■□□□□ 0.79
SNRNP70-203ENST00000544278 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
SNRNP70-203ENST00000544278 VAMP4O75379 141 aa19.98■□□□□ 0.79
SNRNP70-203ENST00000544278 DDX19BQ9UMR2 479 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms