RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 HCSTQ9UBK5 93 aa15.01□□□□□ -0.01
MRPS35-204ENST00000542199 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
MRPS35-204ENST00000542199 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
MRPS35-204ENST00000542199 MAP10Q9P2G4 905 aa15□□□□□ -0.01
MRPS35-204ENST00000542199 MMP16P51512 607 aa14.99□□□□□ -0.01
MRPS35-204ENST00000542199 PTPRNQ16849 979 aa14.99□□□□□ -0.01
MRPS35-204ENST00000542199 F12P00748 615 aaPredicted RBP14.98□□□□□ -0.01
MRPS35-204ENST00000542199 IRF5Q13568 498 aa14.96□□□□□ -0.01
MRPS35-204ENST00000542199 PRM3Q9NNZ6 103 aa14.96□□□□□ -0.01
MRPS35-204ENST00000542199 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
MRPS35-204ENST00000542199 SLC6A16Q9GZN6 736 aa14.95□□□□□ -0.02
MRPS35-204ENST00000542199 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
MRPS35-204ENST00000542199 S1PR4O95977 384 aa14.94□□□□□ -0.02
MRPS35-204ENST00000542199 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
MRPS35-204ENST00000542199 CCNYL3P0C7X3 344 aa14.93□□□□□ -0.02
MRPS35-204ENST00000542199 CTHP32929 405 aa14.92□□□□□ -0.02
MRPS35-204ENST00000542199 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
MRPS35-204ENST00000542199 CUX2O14529 1486 aa14.92□□□□□ -0.02
MRPS35-204ENST00000542199 NESP48681 1621 aa14.92□□□□□ -0.02
MRPS35-204ENST00000542199 ITGBL1O95965 494 aaPredicted RBP14.91□□□□□ -0.02
MRPS35-204ENST00000542199 ZNF330Q9Y3S2 320 aaPredicted RBP14.91□□□□□ -0.02
MRPS35-204ENST00000542199 POM121CA8CG34 1229 aa14.89□□□□□ -0.03
MRPS35-204ENST00000542199 EVA1BQ9NVM1 165 aa14.89□□□□□ -0.03
MRPS35-204ENST00000542199 KCNC4Q03721 635 aa14.88□□□□□ -0.03
MRPS35-204ENST00000542199 CCDC24Q8N4L8 307 aa14.88□□□□□ -0.03
MRPS35-204ENST00000542199 KCNH2Q12809 1159 aa14.87□□□□□ -0.03
MRPS35-204ENST00000542199 VAC14Q08AM6 782 aa14.85□□□□□ -0.03
MRPS35-204ENST00000542199 PTCRAQ6ISU1 281 aaPredicted RBP14.85□□□□□ -0.03
MRPS35-204ENST00000542199 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
MRPS35-204ENST00000542199 FKBPLQ9UIM3 349 aa14.85□□□□□ -0.03
MRPS35-204ENST00000542199 FCF1Q9Y324 198 aaKnown RBP14.85□□□□□ -0.03
MRPS35-204ENST00000542199 PPEF1O14829 653 aaPredicted RBP14.84□□□□□ -0.03
MRPS35-204ENST00000542199 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
MRPS35-204ENST00000542199 ARID3AQ99856 593 aa14.81□□□□□ -0.04
MRPS35-204ENST00000542199 UNC93B1Q9H1C4 597 aa14.81□□□□□ -0.04
MRPS35-204ENST00000542199 PLSCR2Q9NRY7 297 aa14.81□□□□□ -0.04
MRPS35-204ENST00000542199 CCDC82Q8N4S0 544 aa14.79□□□□□ -0.04
MRPS35-204ENST00000542199 PNMA1Q8ND90 353 aa14.79□□□□□ -0.04
MRPS35-204ENST00000542199 WIZO95785 1651 aa14.78□□□□□ -0.04
MRPS35-204ENST00000542199 RNF223E7ERA6 249 aa14.78□□□□□ -0.04
MRPS35-204ENST00000542199 FBXO45P0C2W1 286 aa14.78□□□□□ -0.04
MRPS35-204ENST00000542199 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
MRPS35-204ENST00000542199 ADAMTS19Q8TE59 1207 aa14.78□□□□□ -0.04
MRPS35-204ENST00000542199 GLMNQ92990 594 aa14.77□□□□□ -0.05
MRPS35-204ENST00000542199 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
MRPS35-204ENST00000542199 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
MRPS35-204ENST00000542199 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
MRPS35-204ENST00000542199 ZC3H4Q9UPT8 1303 aaKnown RBP14.75□□□□□ -0.05
MRPS35-204ENST00000542199 PLA2G2CQ5R387 149 aa14.75□□□□□ -0.05
MRPS35-204ENST00000542199 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
MRPS35-204ENST00000542199 NR1H3Q13133 447 aa14.73□□□□□ -0.05
MRPS35-204ENST00000542199 PPP1R18Q6NYC8 613 aa14.73□□□□□ -0.05
MRPS35-204ENST00000542199 ARMC2Q8NEN0 867 aa14.73□□□□□ -0.05
MRPS35-204ENST00000542199 OCSTAMPQ9BR26 566 aa14.73□□□□□ -0.05
MRPS35-204ENST00000542199 ZBBXA8MT70 800 aa14.72□□□□□ -0.05
MRPS35-204ENST00000542199 LINC01559Q495D7 138 aa14.72□□□□□ -0.05
MRPS35-204ENST00000542199 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
MRPS35-204ENST00000542199 CALR3Q96L12 384 aaKnown RBP14.72□□□□□ -0.05
MRPS35-204ENST00000542199 HDGFL1Q5TGJ6 251 aa14.71□□□□□ -0.05
MRPS35-204ENST00000542199 BAP1Q92560 729 aa14.7□□□□□ -0.06
MRPS35-204ENST00000542199 PDXDC2PQ6P474 469 aa14.69□□□□□ -0.06
MRPS35-204ENST00000542199 ANKLE1Q8NAG6 615 aa14.69□□□□□ -0.06
MRPS35-204ENST00000542199 GPKOWQ92917 476 aaPredicted RBP eCLIP14.69□□□□□ -0.061e-7■■■□□ 17.3
MRPS35-204ENST00000542199 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.69□□□□□ -0.06
MRPS35-204ENST00000542199 GGCXP38435 758 aa14.68□□□□□ -0.06
MRPS35-204ENST00000542199 ALG2Q9H553 416 aa14.68□□□□□ -0.06
MRPS35-204ENST00000542199 SH3BP5LQ7L8J4 393 aa14.67□□□□□ -0.06
MRPS35-204ENST00000542199 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
MRPS35-204ENST00000542199 PTK2Q05397 1052 aa14.66□□□□□ -0.06
MRPS35-204ENST00000542199 CCDC97Q96F63 343 aaPredicted RBP14.66□□□□□ -0.06
MRPS35-204ENST00000542199 ZNF511Q8NB15 262 aa14.65□□□□□ -0.06
MRPS35-204ENST00000542199 FOXJ1Q92949 421 aa14.65□□□□□ -0.06
MRPS35-204ENST00000542199 GPSM3Q9Y4H4 160 aa14.65□□□□□ -0.06
MRPS35-204ENST00000542199 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
MRPS35-204ENST00000542199 ARHGAP9Q9BRR9 750 aa14.64□□□□□ -0.07
MRPS35-204ENST00000542199 CARD14Q9BXL6 1004 aa14.64□□□□□ -0.07
MRPS35-204ENST00000542199 EIF4G2P78344 907 aaKnown RBP eCLIP14.63□□□□□ -0.07
MRPS35-204ENST00000542199 C4orf48Q5BLP8 95 aa14.63□□□□□ -0.07
MRPS35-204ENST00000542199 ADAM32Q8TC27 787 aa14.63□□□□□ -0.07
MRPS35-204ENST00000542199 SERPINA10Q9UK55 444 aa14.63□□□□□ -0.07
MRPS35-204ENST00000542199 CFTRP13569 1480 aa14.63□□□□□ -0.07
MRPS35-204ENST00000542199 MAGEB6P1A0A0J9YX57 407 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 SOX11P35716 441 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 SH3BP2P78314 561 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 TRIM32Q13049 653 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
MRPS35-204ENST00000542199 SEMA3FQ13275 785 aa14.61□□□□□ -0.07
MRPS35-204ENST00000542199 EMID1Q96A84 441 aaPredicted RBP14.61□□□□□ -0.07
MRPS35-204ENST00000542199 UCN2Q96RP3 112 aa14.61□□□□□ -0.07
MRPS35-204ENST00000542199 ZBTB24O43167 697 aaPredicted RBP14.6□□□□□ -0.07
MRPS35-204ENST00000542199 AGERQ15109 404 aa14.59□□□□□ -0.07
MRPS35-204ENST00000542199 PCDHB9Q9Y5E1 797 aa14.59□□□□□ -0.07
MRPS35-204ENST00000542199 WDR62O43379 1518 aa14.58□□□□□ -0.08
MRPS35-204ENST00000542199 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
MRPS35-204ENST00000542199 ZBTB33Q86T24 672 aa14.58□□□□□ -0.08
MRPS35-204ENST00000542199 PLA2G2EQ9NZK7 142 aa14.58□□□□□ -0.08
MRPS35-204ENST00000542199 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
MRPS35-204ENST00000542199 SKOR1P84550 965 aa14.57□□□□□ -0.08
MRPS35-204ENST00000542199 LIAT1Q6ZQX7 453 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms