RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
LDHA-217ENST00000539814 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
LDHA-217ENST00000539814 KIF1BO60333 1816 aa11.44□□□□□ -0.58
LDHA-217ENST00000539814 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
LDHA-217ENST00000539814 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
LDHA-217ENST00000539814 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
LDHA-217ENST00000539814 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
LDHA-217ENST00000539814 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
LDHA-217ENST00000539814 ARID3AQ99856 593 aa11.42□□□□□ -0.58
LDHA-217ENST00000539814 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
LDHA-217ENST00000539814 CCER1Q8TC90 406 aaPredicted RBP11.41□□□□□ -0.58
LDHA-217ENST00000539814 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
LDHA-217ENST00000539814 G3V3G9 751 aa11.4□□□□□ -0.58
LDHA-217ENST00000539814 RGL3Q3MIN7 710 aa11.4□□□□□ -0.58
LDHA-217ENST00000539814 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
LDHA-217ENST00000539814 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
LDHA-217ENST00000539814 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.59
LDHA-217ENST00000539814 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
LDHA-217ENST00000539814 SPATA31E1Q6ZUB1 1445 aa11.39□□□□□ -0.59
LDHA-217ENST00000539814 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
LDHA-217ENST00000539814 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
LDHA-217ENST00000539814 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
LDHA-217ENST00000539814 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
LDHA-217ENST00000539814 NEXMIFQ5QGS0 1516 aa11.38□□□□□ -0.59
LDHA-217ENST00000539814 TMEM2Q9UHN6 1383 aa11.38□□□□□ -0.59
LDHA-217ENST00000539814 IFT172Q9UG01 1749 aa11.38□□□□□ -0.59
LDHA-217ENST00000539814 NEURL4Q96JN8 1562 aa11.37□□□□□ -0.59
LDHA-217ENST00000539814 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
LDHA-217ENST00000539814 PPLO60437 1756 aa11.37□□□□□ -0.59
LDHA-217ENST00000539814 SLIT1O75093 1534 aa11.37□□□□□ -0.59
LDHA-217ENST00000539814 ARHGAP23Q9P227 1491 aa11.37□□□□□ -0.59
LDHA-217ENST00000539814 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
LDHA-217ENST00000539814 LTKP29376 864 aa11.36□□□□□ -0.59
LDHA-217ENST00000539814 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
LDHA-217ENST00000539814 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
LDHA-217ENST00000539814 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
LDHA-217ENST00000539814 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
LDHA-217ENST00000539814 FAM117AQ9C073 453 aa11.35□□□□□ -0.59
LDHA-217ENST00000539814 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
LDHA-217ENST00000539814 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
LDHA-217ENST00000539814 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
LDHA-217ENST00000539814 TXNDC2Q86VQ3 553 aa11.34□□□□□ -0.59
LDHA-217ENST00000539814 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
LDHA-217ENST00000539814 DPYSL4O14531 572 aa11.33□□□□□ -0.6
LDHA-217ENST00000539814 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.6
LDHA-217ENST00000539814 GPR37O15354 613 aa11.32□□□□□ -0.6
LDHA-217ENST00000539814 ANKLE2Q86XL3 938 aa11.32□□□□□ -0.6
LDHA-217ENST00000539814 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
LDHA-217ENST00000539814 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
LDHA-217ENST00000539814 PDIA6Q15084 440 aa11.31□□□□□ -0.6
LDHA-217ENST00000539814 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
LDHA-217ENST00000539814 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
LDHA-217ENST00000539814 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
LDHA-217ENST00000539814 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
LDHA-217ENST00000539814 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
LDHA-217ENST00000539814 EID1Q9Y6B2 187 aa11.3□□□□□ -0.6
LDHA-217ENST00000539814 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
LDHA-217ENST00000539814 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 MED14O60244 1454 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 MYOM2P54296 1465 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
LDHA-217ENST00000539814 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
LDHA-217ENST00000539814 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.6
LDHA-217ENST00000539814 SETD1AO15047 1707 aaKnown RBP11.27□□□□□ -0.61
LDHA-217ENST00000539814 APBB1O00213 710 aa11.27□□□□□ -0.61
LDHA-217ENST00000539814 FLIIQ13045 1269 aa11.27□□□□□ -0.61
LDHA-217ENST00000539814 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
LDHA-217ENST00000539814 SETBP1Q9Y6X0 1596 aa11.27□□□□□ -0.61
LDHA-217ENST00000539814 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
LDHA-217ENST00000539814 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
LDHA-217ENST00000539814 NRXN1Q9ULB1 1477 aa11.26□□□□□ -0.61
LDHA-217ENST00000539814 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
LDHA-217ENST00000539814 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
LDHA-217ENST00000539814 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
LDHA-217ENST00000539814 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
LDHA-217ENST00000539814 ALKQ9UM73 1620 aa11.25□□□□□ -0.61
LDHA-217ENST00000539814 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
LDHA-217ENST00000539814 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
LDHA-217ENST00000539814 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
LDHA-217ENST00000539814 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
LDHA-217ENST00000539814 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
LDHA-217ENST00000539814 METP08581 1390 aa11.24□□□□□ -0.61
LDHA-217ENST00000539814 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
LDHA-217ENST00000539814 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
LDHA-217ENST00000539814 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
LDHA-217ENST00000539814 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
LDHA-217ENST00000539814 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
LDHA-217ENST00000539814 AMHR2Q16671 573 aa11.22□□□□□ -0.61
LDHA-217ENST00000539814 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
LDHA-217ENST00000539814 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
LDHA-217ENST00000539814 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
LDHA-217ENST00000539814 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
LDHA-217ENST00000539814 LAMC1P11047 1609 aa11.2□□□□□ -0.62
LDHA-217ENST00000539814 DSG2Q14126 1118 aa11.2□□□□□ -0.62
LDHA-217ENST00000539814 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
LDHA-217ENST00000539814 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
LDHA-217ENST00000539814 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms