RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PTPRMP28827 1452 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 CD163L1Q9NR16 1453 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 NOB1Q9ULX3 412 aaKnown RBP19.05■□□□□ 0.64
SSH3-210ENST00000532881 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
SSH3-210ENST00000532881 YTHDC2Q9H6S0 1430 aaKnown RBP19.05■□□□□ 0.64
SSH3-210ENST00000532881 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
SSH3-210ENST00000532881 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
SSH3-210ENST00000532881 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
SSH3-210ENST00000532881 NEO1Q92859 1461 aa19.03■□□□□ 0.64
SSH3-210ENST00000532881 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
SSH3-210ENST00000532881 FAM69CQ0P6D2 419 aa19.02■□□□□ 0.64
SSH3-210ENST00000532881 NINLQ9Y2I6 1382 aa19.02■□□□□ 0.64
SSH3-210ENST00000532881 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
SSH3-210ENST00000532881 TMEM57Q8N5G2 664 aa19.01■□□□□ 0.63
SSH3-210ENST00000532881 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
SSH3-210ENST00000532881 NSD2O96028 1365 aa19.01■□□□□ 0.63
SSH3-210ENST00000532881 RICTORQ6R327 1708 aa19.01■□□□□ 0.63
SSH3-210ENST00000532881 PUS7Q96PZ0 661 aaKnown RBP19.01■□□□□ 0.63
SSH3-210ENST00000532881 RWDD1Q9H446 243 aaPredicted RBP19.01■□□□□ 0.63
SSH3-210ENST00000532881 PRKAR2BP31323 418 aa19■□□□□ 0.63
SSH3-210ENST00000532881 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
SSH3-210ENST00000532881 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
SSH3-210ENST00000532881 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
SSH3-210ENST00000532881 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
SSH3-210ENST00000532881 GSE1Q14687 1217 aa18.99■□□□□ 0.63
SSH3-210ENST00000532881 ARHGAP31Q2M1Z3 1444 aa18.99■□□□□ 0.63
SSH3-210ENST00000532881 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
SSH3-210ENST00000532881 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
SSH3-210ENST00000532881 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
SSH3-210ENST00000532881 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
SSH3-210ENST00000532881 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
SSH3-210ENST00000532881 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
SSH3-210ENST00000532881 ATAD2Q6PL18 1390 aa18.97■□□□□ 0.63
SSH3-210ENST00000532881 NME9Q86XW9 330 aa18.97■□□□□ 0.63
SSH3-210ENST00000532881 TXNDC2Q86VQ3 553 aa18.96■□□□□ 0.63
SSH3-210ENST00000532881 ALKQ9UM73 1620 aa18.95■□□□□ 0.62
SSH3-210ENST00000532881 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
SSH3-210ENST00000532881 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
SSH3-210ENST00000532881 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
SSH3-210ENST00000532881 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
SSH3-210ENST00000532881 NUTM2FA1L443 756 aa18.94■□□□□ 0.62
SSH3-210ENST00000532881 ZFYVE9O95405 1425 aa18.94■□□□□ 0.62
SSH3-210ENST00000532881 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
SSH3-210ENST00000532881 TSPOAP1O95153 1857 aa18.93■□□□□ 0.62
SSH3-210ENST00000532881 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
SSH3-210ENST00000532881 ARHGEF40Q8TER5 1519 aa18.92■□□□□ 0.62
SSH3-210ENST00000532881 VIRMAQ69YN4 1812 aaKnown RBP18.92■□□□□ 0.62
SSH3-210ENST00000532881 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
SSH3-210ENST00000532881 TBC1D32Q96NH3 1257 aa18.92■□□□□ 0.62
SSH3-210ENST00000532881 TBC1D2Q9BYX2 928 aa18.92■□□□□ 0.62
SSH3-210ENST00000532881 LNPKQ9C0E8 428 aa18.91■□□□□ 0.62
SSH3-210ENST00000532881 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
SSH3-210ENST00000532881 ZBTB40Q9NUA8 1239 aa18.89■□□□□ 0.62
SSH3-210ENST00000532881 LRRC7Q96NW7 1537 aa18.89■□□□□ 0.61
SSH3-210ENST00000532881 PNPLA6Q8IY17 1366 aa18.89■□□□□ 0.61
SSH3-210ENST00000532881 FCHSD2O94868 740 aa18.88■□□□□ 0.61
SSH3-210ENST00000532881 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
SSH3-210ENST00000532881 METP08581 1390 aa18.88■□□□□ 0.61
SSH3-210ENST00000532881 SOX12O15370 315 aa18.87■□□□□ 0.61
SSH3-210ENST00000532881 ARXQ96QS3 562 aa18.87■□□□□ 0.61
SSH3-210ENST00000532881 BECN1Q14457 450 aa18.86■□□□□ 0.61
SSH3-210ENST00000532881 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
SSH3-210ENST00000532881 HDAC1Q13547 482 aaPredicted RBP18.85■□□□□ 0.61
SSH3-210ENST00000532881 AAMPQ13685 434 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
SSH3-210ENST00000532881 VAMP4O75379 141 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 KRT24Q2M2I5 525 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 C22orf23Q9BZE7 217 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
SSH3-210ENST00000532881 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
SSH3-210ENST00000532881 IL13P35225 146 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
SSH3-210ENST00000532881 IL16Q14005 1332 aa18.83■□□□□ 0.61
SSH3-210ENST00000532881 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
SSH3-210ENST00000532881 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
SSH3-210ENST00000532881 SMC5Q8IY18 1101 aa18.83■□□□□ 0.6
SSH3-210ENST00000532881 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
SSH3-210ENST00000532881 CLTCQ00610 1675 aaKnown RBP18.83■□□□□ 0.6
SSH3-210ENST00000532881 AEBP1Q8IUX7 1158 aa18.83■□□□□ 0.6
SSH3-210ENST00000532881 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
SSH3-210ENST00000532881 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
SSH3-210ENST00000532881 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
SSH3-210ENST00000532881 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
SSH3-210ENST00000532881 MED14O60244 1454 aa18.81■□□□□ 0.6
SSH3-210ENST00000532881 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
SSH3-210ENST00000532881 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
SSH3-210ENST00000532881 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
SSH3-210ENST00000532881 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
SSH3-210ENST00000532881 CPS1P31327 1500 aa18.79■□□□□ 0.6
SSH3-210ENST00000532881 SIRT2Q8IXJ6 389 aa18.79■□□□□ 0.6
SSH3-210ENST00000532881 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
SSH3-210ENST00000532881 NUCB1Q02818 461 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms