RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
USP47-207ENST00000527733 NUTM2AQ8IVF1 878 aaPredicted RBP18.7■□□□□ 0.58
USP47-207ENST00000527733 ANKRD36BQ8N2N9 1353 aa18.7■□□□□ 0.58
USP47-207ENST00000527733 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
USP47-207ENST00000527733 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
USP47-207ENST00000527733 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
USP47-207ENST00000527733 ADGBQ8N7X0 1667 aa18.69■□□□□ 0.58
USP47-207ENST00000527733 HDGFL1Q5TGJ6 251 aa18.68■□□□□ 0.58
USP47-207ENST00000527733 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
USP47-207ENST00000527733 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
USP47-207ENST00000527733 GCC2Q8IWJ2 1684 aa18.67■□□□□ 0.58
USP47-207ENST00000527733 ABCC1P33527 1531 aa18.67■□□□□ 0.58
USP47-207ENST00000527733 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
USP47-207ENST00000527733 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 BCAR3O75815 825 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 FYB1O15117 783 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 CABP4P57796 275 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 NPATQ14207 1427 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 ZNF428Q96B54 188 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
USP47-207ENST00000527733 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
USP47-207ENST00000527733 GNAI3P08754 354 aa18.65■□□□□ 0.58
USP47-207ENST00000527733 UBTFL1P0CB47 393 aaPredicted RBP18.65■□□□□ 0.58
USP47-207ENST00000527733 YTHDC2Q9H6S0 1430 aaKnown RBP18.65■□□□□ 0.58
USP47-207ENST00000527733 PREX2Q70Z35 1606 aa18.65■□□□□ 0.58
USP47-207ENST00000527733 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
USP47-207ENST00000527733 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 HSP90AB4PQ58FF6 505 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 FRAT2O75474 233 aaPredicted RBP18.64■□□□□ 0.57
USP47-207ENST00000527733 PDE4AP27815 886 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 G3BP1Q13283 466 aaKnown RBP eCLIP18.64■□□□□ 0.57
USP47-207ENST00000527733 RILPL2Q969X0 211 aa18.64■□□□□ 0.57
USP47-207ENST00000527733 ABCC11Q96J66 1382 aa18.63■□□□□ 0.57
USP47-207ENST00000527733 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
USP47-207ENST00000527733 MSH6P52701 1360 aa18.63■□□□□ 0.57
USP47-207ENST00000527733 MSH5O43196 834 aa18.63■□□□□ 0.57
USP47-207ENST00000527733 ZRSR1Q15695 479 aaKnown RBP18.63■□□□□ 0.57
USP47-207ENST00000527733 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
USP47-207ENST00000527733 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
USP47-207ENST00000527733 KCNA6P17658 529 aa18.62■□□□□ 0.57
USP47-207ENST00000527733 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
USP47-207ENST00000527733 TPRNQ4KMQ1 711 aa18.62■□□□□ 0.57
USP47-207ENST00000527733 ASXL1Q8IXJ9 1541 aa18.61■□□□□ 0.57
USP47-207ENST00000527733 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
USP47-207ENST00000527733 HSPA2P54652 639 aa18.61■□□□□ 0.57
USP47-207ENST00000527733 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
USP47-207ENST00000527733 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
USP47-207ENST00000527733 AMOTQ4VCS5 1084 aa18.6■□□□□ 0.57
USP47-207ENST00000527733 G3V3G9 751 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 NCKAP5LQ9HCH0 1330 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
USP47-207ENST00000527733 MCM10Q7L590 875 aa18.58■□□□□ 0.57
USP47-207ENST00000527733 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
USP47-207ENST00000527733 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
USP47-207ENST00000527733 IFT57Q9NWB7 429 aa18.57■□□□□ 0.56
USP47-207ENST00000527733 TMEM2Q9UHN6 1383 aa18.56■□□□□ 0.56
USP47-207ENST00000527733 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
USP47-207ENST00000527733 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
USP47-207ENST00000527733 LRRFIP1Q32MZ4 808 aaKnown RBP18.56■□□□□ 0.56
USP47-207ENST00000527733 PARD3Q8TEW0 1356 aa18.56■□□□□ 0.56
USP47-207ENST00000527733 GOLGA6L4A6NEF3 574 aa18.56■□□□□ 0.56
USP47-207ENST00000527733 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
USP47-207ENST00000527733 FBLN1P23142 703 aa18.55■□□□□ 0.56
USP47-207ENST00000527733 SLKQ9H2G2 1235 aaPredicted RBP18.55■□□□□ 0.56
USP47-207ENST00000527733 IPO9Q96P70 1041 aaKnown RBP18.55■□□□□ 0.56
USP47-207ENST00000527733 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
USP47-207ENST00000527733 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
USP47-207ENST00000527733 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
USP47-207ENST00000527733 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
USP47-207ENST00000527733 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
USP47-207ENST00000527733 ST18O60284 1047 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 GNAI2P04899 355 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
USP47-207ENST00000527733 KIF6Q6ZMV9 814 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 REC8O95072 547 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
USP47-207ENST00000527733 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
USP47-207ENST00000527733 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
USP47-207ENST00000527733 MIS18AQ9NYP9 233 aa18.52■□□□□ 0.56
USP47-207ENST00000527733 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.55
USP47-207ENST00000527733 KDM6BO15054 1643 aa18.52■□□□□ 0.55
USP47-207ENST00000527733 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.55
USP47-207ENST00000527733 ISY1Q9ULR0 285 aaKnown RBP18.52■□□□□ 0.55
USP47-207ENST00000527733 KDM5DQ9BY66 1539 aa18.51■□□□□ 0.55
USP47-207ENST00000527733 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
USP47-207ENST00000527733 ERC2O15083 957 aa18.51■□□□□ 0.55
USP47-207ENST00000527733 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
USP47-207ENST00000527733 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
USP47-207ENST00000527733 TRPM2O94759 1503 aa18.5■□□□□ 0.55
USP47-207ENST00000527733 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms