RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 MTUS2Q5JR59 1369 aa9.25□□□□□ -0.93
ATM-206ENST00000525056 ABCA9Q8IUA7 1624 aa9.25□□□□□ -0.93
ATM-206ENST00000525056 THSD4Q6ZMP0 1018 aa9.25□□□□□ -0.93
ATM-206ENST00000525056 TRIM66O15016 1216 aa9.24□□□□□ -0.93
ATM-206ENST00000525056 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
ATM-206ENST00000525056 MAGI3Q5TCQ9 1506 aa9.24□□□□□ -0.93
ATM-206ENST00000525056 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
ATM-206ENST00000525056 FAM50AQ14320 339 aaKnown RBP9.23□□□□□ -0.93
ATM-206ENST00000525056 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
ATM-206ENST00000525056 ATP1B4Q9UN42 357 aaPredicted RBP9.23□□□□□ -0.93
ATM-206ENST00000525056 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
ATM-206ENST00000525056 MDM2Q00987 491 aaPredicted RBP9.22□□□□□ -0.93
ATM-206ENST00000525056 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
ATM-206ENST00000525056 NAIPQ13075 1403 aa9.22□□□□□ -0.93
ATM-206ENST00000525056 RAPGEF3O95398 923 aa9.21□□□□□ -0.94
ATM-206ENST00000525056 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
ATM-206ENST00000525056 PTPN5P54829 565 aa9.21□□□□□ -0.94
ATM-206ENST00000525056 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
ATM-206ENST00000525056 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
ATM-206ENST00000525056 POLR1AO95602 1720 aaPredicted RBP9.21□□□□□ -0.94
ATM-206ENST00000525056 NUP153P49790 1475 aaKnown RBP9.21□□□□□ -0.94
ATM-206ENST00000525056 RNF40O75150 1001 aa9.2□□□□□ -0.94
ATM-206ENST00000525056 PPP4CP60510 307 aa9.2□□□□□ -0.94
ATM-206ENST00000525056 AMHR2Q16671 573 aa9.2□□□□□ -0.94
ATM-206ENST00000525056 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
ATM-206ENST00000525056 CLCN1P35523 988 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 ITGAEP38570 1179 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 ROCK1Q13464 1354 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 LRRIQ1Q96JM4 1722 aa9.19□□□□□ -0.94
ATM-206ENST00000525056 PLEKHD1A6NEE1 506 aa9.18□□□□□ -0.94
ATM-206ENST00000525056 DDX10Q13206 875 aaKnown RBP9.18□□□□□ -0.94
ATM-206ENST00000525056 FRMPD1Q5SYB0 1578 aa9.18□□□□□ -0.94
ATM-206ENST00000525056 ARAP3Q8WWN8 1544 aa9.18□□□□□ -0.94
ATM-206ENST00000525056 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
ATM-206ENST00000525056 FANCIQ9NVI1 1328 aa9.18□□□□□ -0.94
ATM-206ENST00000525056 HECW2Q9P2P5 1572 aa9.17□□□□□ -0.94
ATM-206ENST00000525056 CDK13Q14004 1512 aaKnown RBP9.17□□□□□ -0.94
ATM-206ENST00000525056 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
ATM-206ENST00000525056 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
ATM-206ENST00000525056 RICTORQ6R327 1708 aa9.17□□□□□ -0.94
ATM-206ENST00000525056 TTC37Q6PGP7 1564 aa9.16□□□□□ -0.94
ATM-206ENST00000525056 DDX11L8A8MPP1 907 aa9.16□□□□□ -0.94
ATM-206ENST00000525056 SLC10A3P09131 477 aa9.16□□□□□ -0.94
ATM-206ENST00000525056 PDE4DQ08499 809 aa9.16□□□□□ -0.94
ATM-206ENST00000525056 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
ATM-206ENST00000525056 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
ATM-206ENST00000525056 ARID4BQ4LE39 1312 aaPredicted RBP9.15□□□□□ -0.94
ATM-206ENST00000525056 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
ATM-206ENST00000525056 NECTIN2Q92692 538 aa9.15□□□□□ -0.94
ATM-206ENST00000525056 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
ATM-206ENST00000525056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.95
ATM-206ENST00000525056 ADAMTSL3P82987 1691 aa9.14□□□□□ -0.95
ATM-206ENST00000525056 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
ATM-206ENST00000525056 BCORL1Q5H9F3 1711 aa9.14□□□□□ -0.95
ATM-206ENST00000525056 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
ATM-206ENST00000525056 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
ATM-206ENST00000525056 GIGYF2Q6Y7W6 1299 aaKnown RBP9.13□□□□□ -0.95
ATM-206ENST00000525056 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
ATM-206ENST00000525056 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
ATM-206ENST00000525056 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
ATM-206ENST00000525056 SIGLEC1Q9BZZ2 1709 aa9.13□□□□□ -0.95
ATM-206ENST00000525056 RPRD2Q5VT52 1461 aaKnown RBP9.13□□□□□ -0.95
ATM-206ENST00000525056 NEO1Q92859 1461 aa9.13□□□□□ -0.95
ATM-206ENST00000525056 CFAP74Q9C0B2 1584 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
ATM-206ENST00000525056 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 ITSN2Q9NZM3 1697 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 NCOA1Q15788 1441 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 DNMT1P26358 1616 aaKnown RBP9.12□□□□□ -0.95
ATM-206ENST00000525056 KIF14Q15058 1648 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 MADDQ8WXG6 1647 aa9.12□□□□□ -0.95
ATM-206ENST00000525056 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
ATM-206ENST00000525056 RIMS1Q86UR5 1692 aaKnown RBP9.11□□□□□ -0.95
ATM-206ENST00000525056 FANCAO15360 1455 aa9.11□□□□□ -0.95
ATM-206ENST00000525056 CFHP08603 1231 aa9.11□□□□□ -0.95
ATM-206ENST00000525056 APLP1P51693 650 aa9.11□□□□□ -0.95
ATM-206ENST00000525056 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
ATM-206ENST00000525056 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
ATM-206ENST00000525056 ZBED9Q6R2W3 1325 aa9.1□□□□□ -0.95
ATM-206ENST00000525056 CD46P15529 392 aa9.1□□□□□ -0.95
ATM-206ENST00000525056 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
ATM-206ENST00000525056 ROCK2O75116 1388 aaKnown RBP9.1□□□□□ -0.95
ATM-206ENST00000525056 DENND4BO75064 1496 aaPredicted RBP9.09□□□□□ -0.95
ATM-206ENST00000525056 CDC42BPBQ9Y5S2 1711 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 PTPRKQ15262 1439 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 GCGRP47871 477 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 MLECQ14165 292 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 ADGBQ8N7X0 1667 aa9.09□□□□□ -0.95
ATM-206ENST00000525056 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
ATM-206ENST00000525056 FER1L4A9Z1Z3 1794 aa9.07□□□□□ -0.96
ATM-206ENST00000525056 ZMYM4Q5VZL5 1548 aa9.07□□□□□ -0.96
ATM-206ENST00000525056 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
ATM-206ENST00000525056 MS4A1P11836 297 aa9.07□□□□□ -0.96
ATM-206ENST00000525056 GPBP1L1Q9HC44 474 aaPredicted RBP9.07□□□□□ -0.96
ATM-206ENST00000525056 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
ATM-206ENST00000525056 PTPRMP28827 1452 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms