RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 MMP16P51512 607 aa11.33□□□□□ -0.6
PVT1-214ENST00000522875 NR6A1Q15406 480 aa11.33□□□□□ -0.6
PVT1-214ENST00000522875 A6NJR5 290 aa11.32□□□□□ -0.6
PVT1-214ENST00000522875 RAD21O60216 631 aa11.32□□□□□ -0.6
PVT1-214ENST00000522875 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
PVT1-214ENST00000522875 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
PVT1-214ENST00000522875 PTPRNQ16849 979 aa11.31□□□□□ -0.6
PVT1-214ENST00000522875 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
PVT1-214ENST00000522875 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
PVT1-214ENST00000522875 S1PR4O95977 384 aa11.3□□□□□ -0.6
PVT1-214ENST00000522875 KCNC4Q03721 635 aa11.3□□□□□ -0.6
PVT1-214ENST00000522875 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
PVT1-214ENST00000522875 APBB1O00213 710 aa11.29□□□□□ -0.6
PVT1-214ENST00000522875 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
PVT1-214ENST00000522875 ABL2P42684 1182 aa11.29□□□□□ -0.6
PVT1-214ENST00000522875 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
PVT1-214ENST00000522875 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
PVT1-214ENST00000522875 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
PVT1-214ENST00000522875 GPR37L1O60883 481 aa11.28□□□□□ -0.6
PVT1-214ENST00000522875 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
PVT1-214ENST00000522875 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
PVT1-214ENST00000522875 ERCC6Q03468 1493 aa11.27□□□□□ -0.6
PVT1-214ENST00000522875 TRAK2O60296 914 aa11.27□□□□□ -0.61
PVT1-214ENST00000522875 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
PVT1-214ENST00000522875 PRM3Q9NNZ6 103 aa11.27□□□□□ -0.61
PVT1-214ENST00000522875 CTHP32929 405 aa11.26□□□□□ -0.61
PVT1-214ENST00000522875 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
PVT1-214ENST00000522875 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
PVT1-214ENST00000522875 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
PVT1-214ENST00000522875 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
PVT1-214ENST00000522875 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
PVT1-214ENST00000522875 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
PVT1-214ENST00000522875 IRF5Q13568 498 aa11.24□□□□□ -0.61
PVT1-214ENST00000522875 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
PVT1-214ENST00000522875 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
PVT1-214ENST00000522875 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
PVT1-214ENST00000522875 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
PVT1-214ENST00000522875 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
PVT1-214ENST00000522875 WRNQ14191 1432 aaPredicted RBP eCLIP11.2□□□□□ -0.62
PVT1-214ENST00000522875 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
PVT1-214ENST00000522875 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
PVT1-214ENST00000522875 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
PVT1-214ENST00000522875 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
PVT1-214ENST00000522875 PPP1R18Q6NYC8 613 aa11.18□□□□□ -0.62
PVT1-214ENST00000522875 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
PVT1-214ENST00000522875 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
PVT1-214ENST00000522875 VAC14Q08AM6 782 aa11.17□□□□□ -0.62
PVT1-214ENST00000522875 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
PVT1-214ENST00000522875 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
PVT1-214ENST00000522875 WWC1Q8IX03 1113 aa11.16□□□□□ -0.62
PVT1-214ENST00000522875 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
PVT1-214ENST00000522875 CUX1P39880 1505 aa11.14□□□□□ -0.63
PVT1-214ENST00000522875 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
PVT1-214ENST00000522875 PNMA1Q8ND90 353 aa11.14□□□□□ -0.63
PVT1-214ENST00000522875 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
PVT1-214ENST00000522875 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
PVT1-214ENST00000522875 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
PVT1-214ENST00000522875 CUX2O14529 1486 aa11.13□□□□□ -0.63
PVT1-214ENST00000522875 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
PVT1-214ENST00000522875 GGCXP38435 758 aa11.13□□□□□ -0.63
PVT1-214ENST00000522875 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
PVT1-214ENST00000522875 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
PVT1-214ENST00000522875 ARMC2Q8NEN0 867 aa11.12□□□□□ -0.63
PVT1-214ENST00000522875 BAP1Q92560 729 aa11.12□□□□□ -0.63
PVT1-214ENST00000522875 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
PVT1-214ENST00000522875 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
PVT1-214ENST00000522875 FBXO45P0C2W1 286 aa11.11□□□□□ -0.63
PVT1-214ENST00000522875 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
PVT1-214ENST00000522875 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
PVT1-214ENST00000522875 OCSTAMPQ9BR26 566 aa11.1□□□□□ -0.63
PVT1-214ENST00000522875 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 NBPF14Q5TI25 921 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 ADAMTS19Q8TE59 1207 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 WDR62O43379 1518 aa11.09□□□□□ -0.63
PVT1-214ENST00000522875 FGD5Q6ZNL6 1462 aa11.08□□□□□ -0.64
PVT1-214ENST00000522875 NR1H3Q13133 447 aa11.08□□□□□ -0.64
PVT1-214ENST00000522875 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
PVT1-214ENST00000522875 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
PVT1-214ENST00000522875 GLMNQ92990 594 aa11.07□□□□□ -0.64
PVT1-214ENST00000522875 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
PVT1-214ENST00000522875 PTK2Q05397 1052 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 FOXJ1Q92949 421 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 ARID3AQ99856 593 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 SOGA1O94964 1423 aa11.06□□□□□ -0.64
PVT1-214ENST00000522875 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PVT1-214ENST00000522875 SH3BP2P78314 561 aa11.05□□□□□ -0.64
PVT1-214ENST00000522875 TRIM32Q13049 653 aa11.05□□□□□ -0.64
PVT1-214ENST00000522875 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
PVT1-214ENST00000522875 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
PVT1-214ENST00000522875 ARHGAP9Q9BRR9 750 aa11.05□□□□□ -0.64
PVT1-214ENST00000522875 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
PVT1-214ENST00000522875 LIAT1Q6ZQX7 453 aa11.04□□□□□ -0.64
PVT1-214ENST00000522875 FAM9AQ8IZU1 332 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms