RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
VPS13B-210ENST00000521932 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
VPS13B-210ENST00000521932 ADGRB3O60242 1522 aa12.15□□□□□ -0.46
VPS13B-210ENST00000521932 TMEM2Q9UHN6 1383 aa12.15□□□□□ -0.46
VPS13B-210ENST00000521932 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
VPS13B-210ENST00000521932 SPATA31E1Q6ZUB1 1445 aa12.14□□□□□ -0.47
VPS13B-210ENST00000521932 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
VPS13B-210ENST00000521932 SLIT1O75093 1534 aa12.14□□□□□ -0.47
VPS13B-210ENST00000521932 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
VPS13B-210ENST00000521932 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-210ENST00000521932 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
VPS13B-210ENST00000521932 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
VPS13B-210ENST00000521932 KIF1BO60333 1816 aa12.12□□□□□ -0.47
VPS13B-210ENST00000521932 LTKP29376 864 aa12.12□□□□□ -0.47
VPS13B-210ENST00000521932 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS13B-210ENST00000521932 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
VPS13B-210ENST00000521932 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
VPS13B-210ENST00000521932 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
VPS13B-210ENST00000521932 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
VPS13B-210ENST00000521932 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
VPS13B-210ENST00000521932 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
VPS13B-210ENST00000521932 PDE4AP27815 886 aa12.1□□□□□ -0.47
VPS13B-210ENST00000521932 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
VPS13B-210ENST00000521932 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
VPS13B-210ENST00000521932 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
VPS13B-210ENST00000521932 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
VPS13B-210ENST00000521932 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
VPS13B-210ENST00000521932 MED14O60244 1454 aa12.09□□□□□ -0.47
VPS13B-210ENST00000521932 MFSD10Q14728 455 aa12.09□□□□□ -0.47
VPS13B-210ENST00000521932 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
VPS13B-210ENST00000521932 MYO5BQ9ULV0 1848 aa12.09□□□□□ -0.47
VPS13B-210ENST00000521932 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
VPS13B-210ENST00000521932 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
VPS13B-210ENST00000521932 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
VPS13B-210ENST00000521932 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
VPS13B-210ENST00000521932 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
VPS13B-210ENST00000521932 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
VPS13B-210ENST00000521932 STRCQ7RTU9 1775 aa12.07□□□□□ -0.48
VPS13B-210ENST00000521932 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
VPS13B-210ENST00000521932 TIMELESSQ9UNS1 1208 aa12.06□□□□□ -0.48
VPS13B-210ENST00000521932 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
VPS13B-210ENST00000521932 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
VPS13B-210ENST00000521932 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
VPS13B-210ENST00000521932 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
VPS13B-210ENST00000521932 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
VPS13B-210ENST00000521932 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
VPS13B-210ENST00000521932 NPHP4O75161 1426 aaPredicted RBP12.04□□□□□ -0.48
VPS13B-210ENST00000521932 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
VPS13B-210ENST00000521932 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
VPS13B-210ENST00000521932 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-210ENST00000521932 PPLO60437 1756 aa12.03□□□□□ -0.48
VPS13B-210ENST00000521932 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
VPS13B-210ENST00000521932 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
VPS13B-210ENST00000521932 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
VPS13B-210ENST00000521932 MYOM2P54296 1465 aa12.02□□□□□ -0.48
VPS13B-210ENST00000521932 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
VPS13B-210ENST00000521932 IFT172Q9UG01 1749 aa12.02□□□□□ -0.49
VPS13B-210ENST00000521932 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
VPS13B-210ENST00000521932 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
VPS13B-210ENST00000521932 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
VPS13B-210ENST00000521932 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
VPS13B-210ENST00000521932 CFAP44Q96MT7 982 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 PIK3C2GO75747 1445 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 ADAMTS13Q76LX8 1427 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 IQGAP1P46940 1657 aa12□□□□□ -0.49
VPS13B-210ENST00000521932 BCANQ96GW7 911 aa11.99□□□□□ -0.49
VPS13B-210ENST00000521932 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
VPS13B-210ENST00000521932 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
VPS13B-210ENST00000521932 PIK3R4Q99570 1358 aa11.97□□□□□ -0.49
VPS13B-210ENST00000521932 DIP2AQ14689 1571 aa11.96□□□□□ -0.49
VPS13B-210ENST00000521932 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
VPS13B-210ENST00000521932 TBC1D12O60347 775 aa11.96□□□□□ -0.49
VPS13B-210ENST00000521932 CFAP70Q5T0N1 1121 aa11.96□□□□□ -0.49
VPS13B-210ENST00000521932 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
VPS13B-210ENST00000521932 METP08581 1390 aa11.95□□□□□ -0.5
VPS13B-210ENST00000521932 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
VPS13B-210ENST00000521932 KCNA6P17658 529 aa11.94□□□□□ -0.5
VPS13B-210ENST00000521932 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
VPS13B-210ENST00000521932 ZNF335Q9H4Z2 1342 aaPredicted RBP11.92□□□□□ -0.5
VPS13B-210ENST00000521932 SETD1AO15047 1707 aaKnown RBP11.92□□□□□ -0.5
VPS13B-210ENST00000521932 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
VPS13B-210ENST00000521932 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
VPS13B-210ENST00000521932 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
VPS13B-210ENST00000521932 LAMC1P11047 1609 aa11.91□□□□□ -0.5
VPS13B-210ENST00000521932 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
VPS13B-210ENST00000521932 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
VPS13B-210ENST00000521932 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
VPS13B-210ENST00000521932 EVI5O60447 810 aa11.9□□□□□ -0.5
VPS13B-210ENST00000521932 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS13B-210ENST00000521932 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
VPS13B-210ENST00000521932 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
VPS13B-210ENST00000521932 KIAA1210Q9ULL0 1709 aa11.9□□□□□ -0.5
VPS13B-210ENST00000521932 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
VPS13B-210ENST00000521932 ABCC11Q96J66 1382 aa11.9□□□□□ -0.5
VPS13B-210ENST00000521932 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
VPS13B-210ENST00000521932 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
VPS13B-210ENST00000521932 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
VPS13B-210ENST00000521932 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms