RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 KIAA2012Q0VF49 1180 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 HDAC1Q13547 482 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 HSP90AA2PQ14568 343 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 CEP170Q5SW79 1584 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 DCAF8Q5TAQ9 597 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 ANKRD45Q5TZF3 282 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 VIRMAQ69YN4 1812 aaKnown RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 ATF7IPQ6VMQ6 1270 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 ZNF467Q7Z7K2 595 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 RPAP2Q8IXW5 612 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 KDM2BQ8NHM5 1336 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 SNX21Q969T3 373 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 NAP1L5Q96NT1 182 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 MAP7D2Q96T17 732 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 SLKQ9H2G2 1235 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 C14orf93Q9H972 538 aaKnown RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 MBD5Q9P267 1494 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 PDZRN3Q9UPQ7 1066 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 TRAK1Q9UPV9 953 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 MAST1Q9Y2H9 1570 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 ATP6V1DQ9Y5K8 247 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 E9PCH4 1651 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 PREX2Q70Z35 1606 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 IQGAP3Q86VI3 1631 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 SYNMO15061 1565 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 ABCA8O94911 1581 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 PRDM15P57071 1507 aaPredicted RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 DENND4BO75064 1496 aaPredicted RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 COL17A1Q9UMD9 1497 aaPredicted RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 ABCC11Q96J66 1382 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 IGHDP01880 384 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 TPM3P06753 285 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 TPM2P07951 284 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 BRD2P25440 801 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 MFAP1P55081 439 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 CCDC173Q0VFZ6 552 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 CHAF1AQ13111 956 aaPredicted RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 C8orf34Q49A92 452 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 CFAP70Q5T0N1 1121 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 C20orf194Q5TEA3 1177 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 INTS3Q68E01 1043 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 GGT6Q6P531 493 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 KIAA1211Q6ZU35 1233 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 CHD1LQ86WJ1 897 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 AFAP1Q8N556 730 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 PANK1Q8TE04 598 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 UBE2Q2Q8WVN8 375 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 RTF1Q92541 710 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 TBC1D32Q96NH3 1257 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 SLC12A5Q9H2X9 1139 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 NOB1Q9ULX3 412 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 DDX49Q9Y6V7 483 aaKnown RBP2.54□□□□□ -2
RNU1-40P-201ENST00000516816 CACNA1FO60840 1977 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 SPHKAPQ2M3C7 1700 aa2.54□□□□□ -2
RNU1-40P-201ENST00000516816 SHROOM2Q13796 1616 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 UNC13BO14795 1591 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 PLXNC1O60486 1568 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 ZNF608Q9ULD9 1512 aaPredicted RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 ABCC10Q5T3U5 1492 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 DISP3Q9P2K9 1392 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 ZNF521Q96K83 1311 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 GOLGA6L6A8MZA4 724 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 HTATSF1O43719 755 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 RRP9O43818 475 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 CDC45O75419 566 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 MBD3O95983 291 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 PTMAP06454 111 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 DSG3P32926 999 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 MCM5P33992 734 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 CLCN1P35523 988 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 TMPOP42166 694 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 CLCN6P51797 869 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 TERF1P54274 439 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 NUCB1Q02818 461 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 EXOSC9Q06265 439 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 RABEP1Q15276 862 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 HS1BP3Q53T59 392 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 BMP2KLQ5H9B9 411 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 TAF7LQ5H9L4 462 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 DNTTIP2Q5QJE6 756 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 COG3Q96JB2 828 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 STK31Q9BXU1 1019 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 SRCIN1Q9C0H9 1055 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 GZF1Q9H116 711 aaPredicted RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 PDCL3Q9H2J4 239 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 GRPEL1Q9HAV7 217 aa2.53□□□□□ -2
RNU1-40P-201ENST00000516816 CCDC9Q9Y3X0 531 aaKnown RBP2.53□□□□□ -2
RNU1-40P-201ENST00000516816 NEURL4Q96JN8 1562 aa2.53□□□□□ -2.01
RNU1-40P-201ENST00000516816 CLASP1Q7Z460 1538 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 ABCC2Q92887 1545 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 ATAD2Q6PL18 1390 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 SBNO2Q9Y2G9 1366 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 MAP2P11137 1827 aaKnown RBP2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 GOLGA6L4A6NEF3 574 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 ESPNB1AK53 854 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 K7ELQ4 463 aaPredicted RBP2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 STK25O00506 426 aa2.52□□□□□ -2.01
RNU1-40P-201ENST00000516816 EPB41L2O43491 1005 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 466.1 ms