RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 ARAP3Q8WWN8 1544 aa16.31■□□□□ 0.2
PHF3-212ENST00000515594 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
PHF3-212ENST00000515594 IDI1Q13907 227 aa16.3■□□□□ 0.2
PHF3-212ENST00000515594 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
PHF3-212ENST00000515594 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
PHF3-212ENST00000515594 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
PHF3-212ENST00000515594 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
PHF3-212ENST00000515594 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
PHF3-212ENST00000515594 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
PHF3-212ENST00000515594 DDX19BQ9UMR2 479 aa16.29■□□□□ 0.2
PHF3-212ENST00000515594 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
PHF3-212ENST00000515594 FRMPD1Q5SYB0 1578 aa16.29■□□□□ 0.2
PHF3-212ENST00000515594 TRAK2O60296 914 aa16.28■□□□□ 0.2
PHF3-212ENST00000515594 ARHGEF28Q8N1W1 1705 aaKnown RBP16.28■□□□□ 0.2
PHF3-212ENST00000515594 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
PHF3-212ENST00000515594 NEURL4Q96JN8 1562 aa16.27■□□□□ 0.2
PHF3-212ENST00000515594 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.2
PHF3-212ENST00000515594 PHACTR3Q96KR7 559 aa16.27■□□□□ 0.2
PHF3-212ENST00000515594 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
PHF3-212ENST00000515594 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.19
PHF3-212ENST00000515594 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.19
PHF3-212ENST00000515594 SMC5Q8IY18 1101 aa16.27■□□□□ 0.19
PHF3-212ENST00000515594 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
PHF3-212ENST00000515594 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
PHF3-212ENST00000515594 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
PHF3-212ENST00000515594 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
PHF3-212ENST00000515594 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
PHF3-212ENST00000515594 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
PHF3-212ENST00000515594 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
PHF3-212ENST00000515594 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
PHF3-212ENST00000515594 ABCC11Q96J66 1382 aa16.24■□□□□ 0.19
PHF3-212ENST00000515594 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
PHF3-212ENST00000515594 AAMPQ13685 434 aa16.24■□□□□ 0.19
PHF3-212ENST00000515594 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
PHF3-212ENST00000515594 L1TD1Q5T7N2 865 aaKnown RBP16.23■□□□□ 0.19
PHF3-212ENST00000515594 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
PHF3-212ENST00000515594 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 NUCB1Q02818 461 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 ABCC3O15438 1527 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 LMTK2Q8IWU2 1503 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 AK9Q5TCS8 1911 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
PHF3-212ENST00000515594 NEXMIFQ5QGS0 1516 aa16.21■□□□□ 0.19
PHF3-212ENST00000515594 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
PHF3-212ENST00000515594 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
PHF3-212ENST00000515594 TNPO1Q92973 898 aaKnown RBP16.21■□□□□ 0.19
PHF3-212ENST00000515594 EMILIN1Q9Y6C2 1016 aa16.21■□□□□ 0.19
PHF3-212ENST00000515594 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
PHF3-212ENST00000515594 CDK19Q9BWU1 502 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 KIF2CQ99661 725 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 POGZQ7Z3K3 1410 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 APBB1O00213 710 aa16.2■□□□□ 0.18
PHF3-212ENST00000515594 NSD2O96028 1365 aa16.19■□□□□ 0.18
PHF3-212ENST00000515594 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
PHF3-212ENST00000515594 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
PHF3-212ENST00000515594 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
PHF3-212ENST00000515594 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
PHF3-212ENST00000515594 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
PHF3-212ENST00000515594 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
PHF3-212ENST00000515594 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
PHF3-212ENST00000515594 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
PHF3-212ENST00000515594 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
PHF3-212ENST00000515594 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
PHF3-212ENST00000515594 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
PHF3-212ENST00000515594 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
PHF3-212ENST00000515594 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
PHF3-212ENST00000515594 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
PHF3-212ENST00000515594 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
PHF3-212ENST00000515594 IPO8O15397 1037 aaKnown RBP16.16■□□□□ 0.18
PHF3-212ENST00000515594 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
PHF3-212ENST00000515594 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
PHF3-212ENST00000515594 NAP1L5Q96NT1 182 aaPredicted RBP16.16■□□□□ 0.18
PHF3-212ENST00000515594 VAMP4O75379 141 aa16.16■□□□□ 0.18
PHF3-212ENST00000515594 RRS1Q15050 365 aaKnown RBP16.16■□□□□ 0.18
PHF3-212ENST00000515594 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 GRPEL1Q9HAV7 217 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 MBIPQ9NS73 344 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 PTPRMP28827 1452 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 SSFA2P28290 1259 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
PHF3-212ENST00000515594 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 DDIT3P35638 169 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
PHF3-212ENST00000515594 NME9Q86XW9 330 aa16.15■□□□□ 0.18
PHF3-212ENST00000515594 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
PHF3-212ENST00000515594 PIK3C2BO00750 1634 aa16.14■□□□□ 0.17
PHF3-212ENST00000515594 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
PHF3-212ENST00000515594 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
PHF3-212ENST00000515594 YEATS2Q9ULM3 1422 aa16.13■□□□□ 0.17
PHF3-212ENST00000515594 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
PHF3-212ENST00000515594 IL16Q14005 1332 aa16.12■□□□□ 0.17
PHF3-212ENST00000515594 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
PHF3-212ENST00000515594 YTHDC2Q9H6S0 1430 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms