RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 TYW1BQ6NUM6 668 aa6.25□□□□□ -1.41
MATR3-219ENST00000512040 AFAP1Q8N556 730 aa6.25□□□□□ -1.41
MATR3-219ENST00000512040 EPAS1Q99814 870 aa6.25□□□□□ -1.41
MATR3-219ENST00000512040 IQSEC2Q5JU85 1478 aa6.25□□□□□ -1.41
MATR3-219ENST00000512040 MED1Q15648 1581 aaPredicted RBP6.25□□□□□ -1.41
MATR3-219ENST00000512040 CEP170BQ9Y4F5 1589 aaPredicted RBP6.25□□□□□ -1.41
MATR3-219ENST00000512040 ADGBQ8N7X0 1667 aa6.25□□□□□ -1.41
MATR3-219ENST00000512040 STRCP1A6NGW2 1772 aa6.24□□□□□ -1.41
MATR3-219ENST00000512040 TCOF1Q13428 1488 aaKnown RBP6.24□□□□□ -1.41
MATR3-219ENST00000512040 EN1Q05925 392 aaPredicted RBP6.24□□□□□ -1.41
MATR3-219ENST00000512040 PSMD1Q99460 953 aa6.24□□□□□ -1.41
MATR3-219ENST00000512040 CDHR5Q9HBB8 845 aa6.24□□□□□ -1.41
MATR3-219ENST00000512040 RAD21O60216 631 aa6.23□□□□□ -1.41
MATR3-219ENST00000512040 TSR1Q2NL82 804 aaKnown RBP6.23□□□□□ -1.41
MATR3-219ENST00000512040 KCTD17Q8N5Z5 321 aa6.23□□□□□ -1.41
MATR3-219ENST00000512040 FBXW7Q969H0 707 aa6.23□□□□□ -1.41
MATR3-219ENST00000512040 ZDHHC16Q969W1 377 aa6.23□□□□□ -1.41
MATR3-219ENST00000512040 NAP1L5Q96NT1 182 aaPredicted RBP6.23□□□□□ -1.41
MATR3-219ENST00000512040 ZNF335Q9H4Z2 1342 aaPredicted RBP6.23□□□□□ -1.41
MATR3-219ENST00000512040 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
MATR3-219ENST00000512040 ATP7AQ04656 1500 aa6.22□□□□□ -1.41
MATR3-219ENST00000512040 PPP4R3BQ5MIZ7 849 aa6.22□□□□□ -1.41
MATR3-219ENST00000512040 ADAM33Q9BZ11 813 aa6.22□□□□□ -1.41
MATR3-219ENST00000512040 GPR37O15354 613 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 ZMYND10O75800 440 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 ZEB1P37275 1124 aaPredicted RBP6.21□□□□□ -1.42
MATR3-219ENST00000512040 ERICH6BQ5W0A0 696 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 ZNF592Q92610 1267 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 C1orf115Q9H7X2 142 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 VWDEQ8N2E2 1590 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 CCDC18Q5T9S5 1454 aa6.21□□□□□ -1.42
MATR3-219ENST00000512040 TIAM1Q13009 1591 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 CLIP1P30622 1438 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 NPATQ14207 1427 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 PTPRKQ15262 1439 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 PSDA5PKW4 1024 aaPredicted RBP6.2□□□□□ -1.42
MATR3-219ENST00000512040 FCHSD2O94868 740 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 SETQ01105 290 aaPredicted RBP6.2□□□□□ -1.42
MATR3-219ENST00000512040 TRAF7Q6Q0C0 670 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 BARGINQ6ZT62 677 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 KRI1Q8N9T8 703 aaKnown RBP6.2□□□□□ -1.42
MATR3-219ENST00000512040 SLC24A3Q9HC58 644 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 PLA2R1Q13018 1463 aa6.2□□□□□ -1.42
MATR3-219ENST00000512040 XIRP1Q702N8 1843 aaKnown RBP6.2□□□□□ -1.42
MATR3-219ENST00000512040 GPATCH8Q9UKJ3 1502 aaKnown RBP6.2□□□□□ -1.42
MATR3-219ENST00000512040 SRCAPQ6ZRS2 3230 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 A0A0G2JS52 829 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 LCE2BO14633 110 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 PTGDRQ13258 359 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 C6orf132Q5T0Z8 1188 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 EFCAB2Q5VUJ9 269 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 FYCO1Q9BQS8 1478 aa6.19□□□□□ -1.42
MATR3-219ENST00000512040 ZC3H13Q5T200 1668 aaKnown RBP6.19□□□□□ -1.42
MATR3-219ENST00000512040 CASKIN1Q8WXD9 1431 aa6.18□□□□□ -1.42
MATR3-219ENST00000512040 ZNF775Q96BV0 537 aaPredicted RBP6.18□□□□□ -1.42
MATR3-219ENST00000512040 ANP32EQ9BTT0 268 aa6.18□□□□□ -1.42
MATR3-219ENST00000512040 CNTLNQ9NXG0 1405 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 A2MP01023 1474 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 GNPATO15228 680 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 FECHP22830 423 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 HIC1Q14526 733 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 LAPTM4AQ15012 233 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 CERS3Q8IU89 383 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
MATR3-219ENST00000512040 BCL2L12Q9HB09 334 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 NPDC1Q9NQX5 325 aaPredicted RBP6.17□□□□□ -1.42
MATR3-219ENST00000512040 BRPF3Q9ULD4 1205 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 MROH1Q8NDA8 1641 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 ZMYM3Q14202 1370 aa6.17□□□□□ -1.42
MATR3-219ENST00000512040 MBD5Q9P267 1494 aa6.16□□□□□ -1.42
MATR3-219ENST00000512040 NCLP19338 710 aaKnown RBP6.16□□□□□ -1.42
MATR3-219ENST00000512040 PTPREP23469 700 aa6.16□□□□□ -1.42
MATR3-219ENST00000512040 KCNK17Q96T54 332 aa6.16□□□□□ -1.42
MATR3-219ENST00000512040 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
MATR3-219ENST00000512040 MTMR7Q9Y216 660 aa6.16□□□□□ -1.42
MATR3-219ENST00000512040 CLSPNQ9HAW4 1339 aa6.16□□□□□ -1.42
MATR3-219ENST00000512040 SETD1AO15047 1707 aaKnown RBP6.16□□□□□ -1.42
MATR3-219ENST00000512040 A2ML1A8K2U0 1454 aa6.15□□□□□ -1.42
MATR3-219ENST00000512040 IQGAP1P46940 1657 aa6.15□□□□□ -1.42
MATR3-219ENST00000512040 COL9A1P20849 921 aa6.15□□□□□ -1.42
MATR3-219ENST00000512040 TRAIPQ9BWF2 469 aa6.15□□□□□ -1.42
MATR3-219ENST00000512040 RNF17Q9BXT8 1623 aaKnown RBP6.14□□□□□ -1.43
MATR3-219ENST00000512040 CEP152O94986 1710 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
MATR3-219ENST00000512040 MAP2K5Q13163 448 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 PADI6Q6TGC4 694 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 KDM5DQ9BY66 1539 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 SYNMO15061 1565 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 DEPDC5O75140 1603 aa6.14□□□□□ -1.43
MATR3-219ENST00000512040 UBR1Q8IWV7 1749 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 E9PSI1 815 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 UBAP1LF5GYI3 381 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 HSPA1LP34931 641 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 PSEN2P49810 448 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 HNRNPMP52272 730 aaKnown RBP eCLIP6.13□□□□□ -1.43
MATR3-219ENST00000512040 TEX2Q8IWB9 1127 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 CCDC102AQ96A19 550 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 CCDC136Q96JN2 1154 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 AK7Q96M32 723 aa6.13□□□□□ -1.43
MATR3-219ENST00000512040 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms