RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 NGEFQ8N5V2 710 aa7.29□□□□□ -1.24
SOX2-OT-218ENST00000498731 NLRP1Q9C000 1473 aa7.28□□□□□ -1.24
SOX2-OT-218ENST00000498731 GLI2P10070 1586 aa7.28□□□□□ -1.24
SOX2-OT-218ENST00000498731 SLC52A1Q9NWF4 448 aa7.28□□□□□ -1.24
SOX2-OT-218ENST00000498731 MRE11P49959 708 aa7.28□□□□□ -1.24
SOX2-OT-218ENST00000498731 PPRC1Q5VV67 1664 aaKnown RBP7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 NEO1Q92859 1461 aa7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 ERBINQ96RT1 1412 aa7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 UTP14CQ5TAP6 766 aaKnown RBP7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 TMCO4Q5TGY1 634 aa7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 TRIM44Q96DX7 344 aaPredicted RBP7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 ABCC1P33527 1531 aa7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 FAM43BQ6ZT52 329 aaPredicted RBP7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 ILDR1Q86SU0 546 aaPredicted RBP7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 PLA2R1Q13018 1463 aa7.27□□□□□ -1.25
SOX2-OT-218ENST00000498731 CROCC2H7BZ55 1655 aa7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 IDI1Q13907 227 aa7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 MPNDQ8N594 471 aa7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 KTN1Q86UP2 1357 aaKnown RBP7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 WDR43Q15061 677 aaKnown RBP eCLIP7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 ATP7AQ04656 1500 aa7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 A2MP01023 1474 aa7.26□□□□□ -1.25
SOX2-OT-218ENST00000498731 NUTM2FA1L443 756 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 IGHDP01880 384 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 PRR29P0C7W0 189 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 RBM33Q96EV2 1170 aaKnown RBP7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 ABCA9Q8IUA7 1624 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 DISP3Q9P2K9 1392 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 ZNF518AQ6AHZ1 1483 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 CLUAP1Q96AJ1 413 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 CCDC94Q9BW85 323 aaPredicted RBP7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 PRAG1Q86YV5 1406 aa7.25□□□□□ -1.25
SOX2-OT-218ENST00000498731 MINK1Q8N4C8 1332 aaPredicted RBP7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 UGGT1Q9NYU2 1555 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 ATXN8OSP0DMR3 200 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 PIP4K2BP78356 416 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 NKX1-1Q15270 411 aaPredicted RBP7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 ZC3H15Q8WU90 426 aaKnown RBP7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 NCKAP5LQ9HCH0 1330 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 ZFYVE16Q7Z3T8 1539 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 PTPRMP28827 1452 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 ARAP3Q8WWN8 1544 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 CCDC146Q8IYE0 955 aa7.24□□□□□ -1.25
SOX2-OT-218ENST00000498731 RTEL1-TNFRSF6BF6WH68 1400 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 CHRM1P11229 460 aaPredicted RBP7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 EP400NLQ6ZTU2 488 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 ZSCAN30Q86W11 494 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 SLC12A5Q9H2X9 1139 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 SPATA31E1Q6ZUB1 1445 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 ATP10AO60312 1499 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 UNCXA6NJT0 531 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 VGFO15240 615 aaPredicted RBP7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 TESK2Q96S53 571 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 NOS1P29475 1434 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 RALGAPBQ86X10 1494 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 CLSTN1O94985 981 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 RALBP1Q15311 655 aa7.23□□□□□ -1.25
SOX2-OT-218ENST00000498731 MYBBP1AQ9BQG0 1328 aaKnown RBP7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 SRCAPQ6ZRS2 3230 aa7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 SMARCA5O60264 1052 aaPredicted RBP7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 NLRP13Q86W25 1043 aa7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 TRERF1Q96PN7 1200 aa7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 BRD1O95696 1058 aa7.22□□□□□ -1.25
SOX2-OT-218ENST00000498731 C17orf53Q8N3J3 647 aaPredicted RBP7.21□□□□□ -1.25
SOX2-OT-218ENST00000498731 ZMYM3Q14202 1370 aa7.21□□□□□ -1.25
SOX2-OT-218ENST00000498731 CAPN2P17655 700 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 TEX2Q8IWB9 1127 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 BCORL1Q5H9F3 1711 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 SOX12O15370 315 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 MORC1Q86VD1 984 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 AK9Q5TCS8 1911 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 MAST1Q9Y2H9 1570 aa7.21□□□□□ -1.26
SOX2-OT-218ENST00000498731 DNTTIP2Q5QJE6 756 aaKnown RBP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 CC2D2BQ6DHV5 1058 aa7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 CHAMP1Q96JM3 812 aa7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 EIF3AQ14152 1382 aaKnown RBP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 UHRF1BP1Q6BDS2 1440 aa7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 U2AF2P26368 475 aaKnown RBP eCLIP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 KCNJ4P48050 445 aa7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 LRPPRCP42704 1394 aaKnown RBP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 VIRMAQ69YN4 1812 aaKnown RBP7.2□□□□□ -1.26
SOX2-OT-218ENST00000498731 MADDQ8WXG6 1647 aa7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 PRAM1Q96QH2 718 aa7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 PPP1R9BQ96SB3 815 aa7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 MSNP26038 577 aaKnown RBP7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 WAPLQ7Z5K2 1190 aa7.19□□□□□ -1.26
SOX2-OT-218ENST00000498731 RIMS1Q86UR5 1692 aaKnown RBP7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 NPATQ14207 1427 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 SLC26A8Q96RN1 970 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 MAP7D2Q96T17 732 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 HECW2Q9P2P5 1572 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms