RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 HOXA2O43364 376 aa7.42□□□□□ -1.22
CMSS1-209ENST00000497345 MMP16P51512 607 aa7.42□□□□□ -1.22
CMSS1-209ENST00000497345 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
CMSS1-209ENST00000497345 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
CMSS1-209ENST00000497345 FAM187AA6NFU0 413 aa7.41□□□□□ -1.22
CMSS1-209ENST00000497345 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
CMSS1-209ENST00000497345 ZC3H15Q8WU90 426 aaKnown RBP7.41□□□□□ -1.22
CMSS1-209ENST00000497345 SSTR3P32745 418 aaPredicted RBP7.4□□□□□ -1.22
CMSS1-209ENST00000497345 CTTNBP2Q8WZ74 1663 aa7.39□□□□□ -1.23
CMSS1-209ENST00000497345 DXOO77932 396 aaKnown RBP7.39□□□□□ -1.23
CMSS1-209ENST00000497345 GUCA2AQ02747 115 aa7.39□□□□□ -1.23
CMSS1-209ENST00000497345 PCGF6Q9BYE7 350 aa7.39□□□□□ -1.23
CMSS1-209ENST00000497345 ARAP1Q96P48 1450 aa7.38□□□□□ -1.23
CMSS1-209ENST00000497345 TOR4AQ9NXH8 423 aa7.38□□□□□ -1.23
CMSS1-209ENST00000497345 SYNJ2O15056 1496 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 GRIN2AQ12879 1464 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 MAGI1Q96QZ7 1491 aaPredicted RBP7.37□□□□□ -1.23
CMSS1-209ENST00000497345 ARHGAP35Q9NRY4 1499 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 FHOD3Q2V2M9 1422 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 CYP4X1Q8N118 509 aa7.37□□□□□ -1.23
CMSS1-209ENST00000497345 SYMPKQ92797 1274 aaKnown RBP7.37□□□□□ -1.23
CMSS1-209ENST00000497345 TRIM32Q13049 653 aa7.36□□□□□ -1.23
CMSS1-209ENST00000497345 AMHR2Q16671 573 aa7.36□□□□□ -1.23
CMSS1-209ENST00000497345 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
CMSS1-209ENST00000497345 VPS8Q8N3P4 1428 aa7.35□□□□□ -1.23
CMSS1-209ENST00000497345 CHD1O14646 1710 aa7.35□□□□□ -1.23
CMSS1-209ENST00000497345 FDX1P10109 184 aa7.35□□□□□ -1.23
CMSS1-209ENST00000497345 TTLL12Q14166 644 aaPredicted RBP7.35□□□□□ -1.23
CMSS1-209ENST00000497345 SPIRE2Q8WWL2 714 aa7.35□□□□□ -1.23
CMSS1-209ENST00000497345 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
CMSS1-209ENST00000497345 CEP170Q5SW79 1584 aa7.34□□□□□ -1.23
CMSS1-209ENST00000497345 WNT7AO00755 349 aa7.34□□□□□ -1.23
CMSS1-209ENST00000497345 JUNDP17535 347 aa7.34□□□□□ -1.23
CMSS1-209ENST00000497345 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
CMSS1-209ENST00000497345 AAASQ9NRG9 546 aa7.34□□□□□ -1.23
CMSS1-209ENST00000497345 IQGAP2Q13576 1575 aa7.33□□□□□ -1.24
CMSS1-209ENST00000497345 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-209ENST00000497345 POTECB2RU33 542 aa7.33□□□□□ -1.24
CMSS1-209ENST00000497345 ST8SIA5O15466 376 aa7.33□□□□□ -1.24
CMSS1-209ENST00000497345 AVPP01185 164 aa7.33□□□□□ -1.24
CMSS1-209ENST00000497345 GIGYF2Q6Y7W6 1299 aaKnown RBP7.33□□□□□ -1.24
CMSS1-209ENST00000497345 C6orf229H3BNL8 230 aa7.32□□□□□ -1.24
CMSS1-209ENST00000497345 NDUFV2P19404 249 aa7.32□□□□□ -1.24
CMSS1-209ENST00000497345 CRIPAKQ8N1N5 446 aa7.32□□□□□ -1.24
CMSS1-209ENST00000497345 SNIP1Q8TAD8 396 aaKnown RBP7.32□□□□□ -1.24
CMSS1-209ENST00000497345 MOXD2PA6NHM9 499 aa7.31□□□□□ -1.24
CMSS1-209ENST00000497345 TRIM26Q12899 539 aaPredicted RBP7.31□□□□□ -1.24
CMSS1-209ENST00000497345 KANK4Q5T7N3 995 aaPredicted RBP7.31□□□□□ -1.24
CMSS1-209ENST00000497345 ZNF775Q96BV0 537 aaPredicted RBP7.31□□□□□ -1.24
CMSS1-209ENST00000497345 MRGPRX2Q96LB1 330 aa7.31□□□□□ -1.24
CMSS1-209ENST00000497345 AK7Q96M32 723 aa7.31□□□□□ -1.24
CMSS1-209ENST00000497345 BEGAINQ9BUH8 593 aa7.31□□□□□ -1.24
CMSS1-209ENST00000497345 KIAA0586Q9BVV6 1533 aa7.31□□□□□ -1.24
CMSS1-209ENST00000497345 TRIM66O15016 1216 aa7.3□□□□□ -1.24
CMSS1-209ENST00000497345 RC3H1Q5TC82 1133 aaKnown RBP7.3□□□□□ -1.24
CMSS1-209ENST00000497345 NUDT12Q9BQG2 462 aa7.3□□□□□ -1.24
CMSS1-209ENST00000497345 EFCAB5A4FU69 1503 aa7.3□□□□□ -1.24
CMSS1-209ENST00000497345 NUP160Q12769 1436 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 AXIN1O15169 862 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 SMPD1P17405 629 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 WNT7BP56706 349 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 SKOR1P84550 965 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 CTC1Q2NKJ3 1217 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 PTCRAQ6ISU1 281 aaPredicted RBP7.29□□□□□ -1.24
CMSS1-209ENST00000497345 PCF11O94913 1555 aaKnown RBP7.29□□□□□ -1.24
CMSS1-209ENST00000497345 SAMD9Q5K651 1589 aa7.29□□□□□ -1.24
CMSS1-209ENST00000497345 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
CMSS1-209ENST00000497345 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
CMSS1-209ENST00000497345 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
CMSS1-209ENST00000497345 PRG4Q92954 1404 aaPredicted RBP7.27□□□□□ -1.24
CMSS1-209ENST00000497345 SPDYE5A6NIY4 337 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 J3QL48 77 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 MS4A1P11836 297 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 GJA5P36382 358 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 MTMR2Q13614 643 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 TBC1D2Q9BYX2 928 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 DISP1Q96F81 1524 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 UGGT2Q9NYU1 1516 aa7.27□□□□□ -1.25
CMSS1-209ENST00000497345 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 EVA1BQ9NVM1 165 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 KIAA0556O60303 1618 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 FMN1Q68DA7 1419 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 CARMIL2Q6F5E8 1435 aa7.26□□□□□ -1.25
CMSS1-209ENST00000497345 PTPRNQ16849 979 aa7.25□□□□□ -1.25
CMSS1-209ENST00000497345 DESI1Q6ICB0 168 aa7.25□□□□□ -1.25
CMSS1-209ENST00000497345 RSBN1LQ6PCB5 846 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-209ENST00000497345 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
CMSS1-209ENST00000497345 ITGAEP38570 1179 aa7.24□□□□□ -1.25
CMSS1-209ENST00000497345 PCDHB15Q9Y5E8 787 aa7.24□□□□□ -1.25
CMSS1-209ENST00000497345 ERCC6L2Q5T890 1561 aa7.24□□□□□ -1.25
CMSS1-209ENST00000497345 SPTLC1O15269 473 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 PDE4DQ08499 809 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 KCNH2Q12809 1159 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 RIC3Q7Z5B4 369 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 HPS1Q92902 700 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 GMPR2Q9P2T1 348 aaKnown RBP7.23□□□□□ -1.25
CMSS1-209ENST00000497345 TIAM1Q13009 1591 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms