RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 MS4A3Q96HJ5 214 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 ZBTB47Q9UFB7 747 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 SBNO1A3KN83 1393 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 PXDNQ92626 1479 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 ITSN1Q15811 1721 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 ARID3CA6NKF2 412 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 THSD7AQ9UPZ6 1657 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 COL14A1Q05707 1796 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 RREB1Q92766 1687 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 USP32Q8NFA0 1604 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 C1orf167Q5SNV9 1468 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 CCDC144AA2RUR9 1427 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 ANKRD30BQ9BXX2 1392 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 SOS2Q07890 1332 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 LTKP29376 864 aa4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 FBXO31Q5XUX0 539 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-203ENST00000488146 TRPM1Q7Z4N2 1603 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 SLIT2O94813 1529 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 ATP7BP35670 1465 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 BCL9O00512 1426 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 SLAIN2Q9P270 581 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 COL24A1Q17RW2 1714 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 QSER1Q2KHR3 1735 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 RGS12O14924 1447 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 TRPM3Q9HCF6 1732 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 ZNF644Q9H582 1327 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 PLCH1Q4KWH8 1693 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 RBM6P78332 1123 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 PELP1Q8IZL8 1130 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 FNBP4Q8N3X1 1017 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 CCDC61Q9Y6R9 512 aa4.24□□□□□ -1.73
DEPDC1-203ENST00000488146 PTPRUQ92729 1446 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 ALS2Q96Q42 1657 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 GSE1Q14687 1217 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 ASTLQ6HA08 431 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 LRRC59Q96AG4 307 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 NGLY1Q96IV0 654 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 ZNF777Q9ULD5 760 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 BLMP54132 1417 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 ABCC11Q96J66 1382 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 PPP1R15AO75807 674 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 IDI1Q13907 227 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 FAM212AQ96EL1 285 aa4.23□□□□□ -1.73
DEPDC1-203ENST00000488146 TOPAZ1Q8N9V7 1692 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 ATMINO43313 823 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 PROSER2Q86WR7 435 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 UPF1Q92900 1129 aaKnown RBP eCLIP4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 POTEB2H3BUK9 544 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 SLC39A7Q92504 469 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 OTUD5Q96G74 571 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 METRNQ9UJH8 293 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 TNS1Q9HBL0 1735 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 ARHGEF10O15013 1369 aa4.22□□□□□ -1.73
DEPDC1-203ENST00000488146 KIF12Q96FN5 646 aa4.21□□□□□ -1.73
DEPDC1-203ENST00000488146 WNK3Q9BYP7 1800 aa4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 ONECUT3O60422 494 aaPredicted RBP4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 ATF3P18847 181 aa4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 HMGB2P26583 209 aaKnown RBP4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 RXRBP28702 533 aa4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 KCNV2Q8TDN2 545 aa4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 GTF3C3Q9Y5Q9 886 aa4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 PARP4Q9UKK3 1724 aaKnown RBP4.21□□□□□ -1.74
DEPDC1-203ENST00000488146 PIK3C2GO75747 1445 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 SPATA31E1Q6ZUB1 1445 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 VGFO15240 615 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 C7P10643 843 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 POTEAQ6S8J7 498 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 TRPC5Q9UL62 973 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 PLEKHG2Q9H7P9 1386 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 GLI3P10071 1580 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 HRCP23327 699 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 ATP1B4Q9UN42 357 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 PCDHB8Q9UN66 801 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 PCDHB13Q9Y5F0 798 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 BCL9LQ86UU0 1499 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 NPHP3Q7Z494 1330 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 TULP4Q9NRJ4 1543 aa4.2□□□□□ -1.74
DEPDC1-203ENST00000488146 BRINP3Q76B58 766 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 TNS3Q68CZ2 1445 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 AATKQ6ZMQ8 1374 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 MAP3K13O43283 966 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 ATN1P54259 1190 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 NAIPQ13075 1403 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 QRICH2Q9H0J4 1663 aa4.19□□□□□ -1.74
DEPDC1-203ENST00000488146 PHRF1Q9P1Y6 1649 aaKnown RBP4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 PIP4K2BP78356 416 aa4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 BMP2KQ9NSY1 1161 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 CAMTA1Q9Y6Y1 1673 aa4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 MAP3K5Q99683 1374 aa4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 LMO7Q8WWI1 1683 aa4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 FAM208AQ9UK61 1670 aaKnown RBP4.18□□□□□ -1.74
DEPDC1-203ENST00000488146 NUP155O75694 1391 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 NINLQ9Y2I6 1382 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 NUP188Q5SRE5 1749 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 PEAK1Q9H792 1746 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 TIE1P35590 1138 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 MAMSTRQ6ZN01 415 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 TRPC6Q9Y210 931 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 ADGRB1O14514 1584 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 CASZ1Q86V15 1759 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms