RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ADGRL2O95490 1459 aa10.78□□□□□ -0.68
CHD6-209ENST00000482596 NRXN3Q9Y4C0 1643 aa10.77□□□□□ -0.68
CHD6-209ENST00000482596 CROCC2H7BZ55 1655 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 TSPY4P0CV99 314 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 TSPY10P0CW01 314 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
CHD6-209ENST00000482596 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
CHD6-209ENST00000482596 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
CHD6-209ENST00000482596 ZNF526Q8TF50 670 aaPredicted RBP10.77□□□□□ -0.69
CHD6-209ENST00000482596 WDR90Q96KV7 1748 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 FAM196AQ6ZSG2 479 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 NPHP3Q7Z494 1330 aa10.76□□□□□ -0.69
CHD6-209ENST00000482596 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
CHD6-209ENST00000482596 FOXO3O43524 673 aa10.75□□□□□ -0.69
CHD6-209ENST00000482596 ABCA3Q99758 1704 aa10.75□□□□□ -0.69
CHD6-209ENST00000482596 HTRA3P83110 453 aa10.74□□□□□ -0.69
CHD6-209ENST00000482596 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
CHD6-209ENST00000482596 JMYQ8N9B5 988 aa10.74□□□□□ -0.69
CHD6-209ENST00000482596 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHD6-209ENST00000482596 METP08581 1390 aa10.74□□□□□ -0.69
CHD6-209ENST00000482596 LMTK2Q8IWU2 1503 aa10.73□□□□□ -0.69
CHD6-209ENST00000482596 DUOX2Q9NRD8 1548 aa10.73□□□□□ -0.69
CHD6-209ENST00000482596 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
CHD6-209ENST00000482596 MAP3K5Q99683 1374 aa10.72□□□□□ -0.69
CHD6-209ENST00000482596 NEXMIFQ5QGS0 1516 aa10.72□□□□□ -0.69
CHD6-209ENST00000482596 HAX1O00165 279 aa10.71□□□□□ -0.69
CHD6-209ENST00000482596 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
CHD6-209ENST00000482596 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
CHD6-209ENST00000482596 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
CHD6-209ENST00000482596 SPATA31A3Q5VYP0 1347 aa10.71□□□□□ -0.69
CHD6-209ENST00000482596 KLRG1Q96E93 195 aa10.71□□□□□ -0.69
CHD6-209ENST00000482596 ARXQ96QS3 562 aa10.71□□□□□ -0.69
CHD6-209ENST00000482596 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
CHD6-209ENST00000482596 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
CHD6-209ENST00000482596 KIF3CO14782 793 aa10.7□□□□□ -0.7
CHD6-209ENST00000482596 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
CHD6-209ENST00000482596 ABCC5O15440 1437 aa10.68□□□□□ -0.7
CHD6-209ENST00000482596 ADCY9O60503 1353 aa10.68□□□□□ -0.7
CHD6-209ENST00000482596 KANK1Q14678 1352 aa10.68□□□□□ -0.7
CHD6-209ENST00000482596 YBX3P16989 372 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHD6-209ENST00000482596 MTFR1LQ9H019 292 aa10.68□□□□□ -0.7
CHD6-209ENST00000482596 RGPD3A6NKT7 1758 aaPredicted RBP10.67□□□□□ -0.7
CHD6-209ENST00000482596 RGPD4Q7Z3J3 1758 aa10.67□□□□□ -0.7
CHD6-209ENST00000482596 AATKQ6ZMQ8 1374 aa10.67□□□□□ -0.7
CHD6-209ENST00000482596 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
CHD6-209ENST00000482596 EEA1Q15075 1411 aa10.67□□□□□ -0.7
CHD6-209ENST00000482596 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
CHD6-209ENST00000482596 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
CHD6-209ENST00000482596 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
CHD6-209ENST00000482596 NLGN2Q8NFZ4 835 aa10.65□□□□□ -0.7
CHD6-209ENST00000482596 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
CHD6-209ENST00000482596 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
CHD6-209ENST00000482596 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
CHD6-209ENST00000482596 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
CHD6-209ENST00000482596 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
CHD6-209ENST00000482596 ROBO2Q9HCK4 1378 aa10.64□□□□□ -0.71
CHD6-209ENST00000482596 KIF15Q9NS87 1388 aa10.64□□□□□ -0.71
CHD6-209ENST00000482596 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
CHD6-209ENST00000482596 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
CHD6-209ENST00000482596 LRPPRCP42704 1394 aaKnown RBP10.62□□□□□ -0.71
CHD6-209ENST00000482596 KIAA1210Q9ULL0 1709 aa10.61□□□□□ -0.71
CHD6-209ENST00000482596 TNS3Q68CZ2 1445 aa10.61□□□□□ -0.71
CHD6-209ENST00000482596 PTF1AQ7RTS3 328 aa10.61□□□□□ -0.71
CHD6-209ENST00000482596 RRP7BPQ9NSQ0 103 aa10.61□□□□□ -0.71
CHD6-209ENST00000482596 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
CHD6-209ENST00000482596 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
CHD6-209ENST00000482596 PLSCR1O15162 318 aa10.6□□□□□ -0.71
CHD6-209ENST00000482596 GRIN3BO60391 1043 aa10.6□□□□□ -0.71
CHD6-209ENST00000482596 SLC15A2Q16348 729 aa10.6□□□□□ -0.71
CHD6-209ENST00000482596 KRT28Q7Z3Y7 464 aa10.6□□□□□ -0.71
CHD6-209ENST00000482596 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
CHD6-209ENST00000482596 STK32BQ9NY57 414 aa10.59□□□□□ -0.71
CHD6-209ENST00000482596 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
CHD6-209ENST00000482596 TECPR2O15040 1411 aa10.58□□□□□ -0.72
CHD6-209ENST00000482596 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
CHD6-209ENST00000482596 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
CHD6-209ENST00000482596 RRBP1Q9P2E9 1410 aaKnown RBP10.58□□□□□ -0.72
CHD6-209ENST00000482596 TOMM70O94826 608 aa10.57□□□□□ -0.72
CHD6-209ENST00000482596 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
CHD6-209ENST00000482596 MIER1Q8N108 512 aa10.57□□□□□ -0.72
CHD6-209ENST00000482596 TNRC18O15417 2968 aaPredicted RBP10.56□□□□□ -0.72
CHD6-209ENST00000482596 PEAK1Q9H792 1746 aa10.56□□□□□ -0.72
CHD6-209ENST00000482596 EVX2Q03828 476 aa10.56□□□□□ -0.72
CHD6-209ENST00000482596 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
CHD6-209ENST00000482596 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
CHD6-209ENST00000482596 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
CHD6-209ENST00000482596 IQGAP3Q86VI3 1631 aa10.55□□□□□ -0.72
CHD6-209ENST00000482596 KIF1AQ12756 1690 aa10.55□□□□□ -0.72
CHD6-209ENST00000482596 MLLT1Q03111 559 aaPredicted RBP10.55□□□□□ -0.72
CHD6-209ENST00000482596 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
CHD6-209ENST00000482596 RGPD8O14715 1765 aaPredicted RBP10.53□□□□□ -0.72
CHD6-209ENST00000482596 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
CHD6-209ENST00000482596 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
CHD6-209ENST00000482596 TOPAZ1Q8N9V7 1692 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms