RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
RPN1-203ENST00000479113 ACTN4O43707 911 aaKnown RBP6.66□□□□□ -1.34
RPN1-203ENST00000479113 COPS2P61201 443 aa6.66□□□□□ -1.34
RPN1-203ENST00000479113 LAPTM4AQ15012 233 aa6.66□□□□□ -1.34
RPN1-203ENST00000479113 Q6ZNB5 142 aa6.66□□□□□ -1.34
RPN1-203ENST00000479113 NKX2-3Q8TAU0 364 aa6.66□□□□□ -1.34
RPN1-203ENST00000479113 ABCA8O94911 1581 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 PPRC1Q5VV67 1664 aaKnown RBP6.65□□□□□ -1.34
RPN1-203ENST00000479113 KDM4AO75164 1064 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 ZPR1O75312 459 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 FUT2Q10981 343 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 MLECQ14165 292 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 KMT5BQ4FZB7 885 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 PRKD2Q9BZL6 878 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 PCDHB3Q9Y5E6 796 aa6.65□□□□□ -1.34
RPN1-203ENST00000479113 V9GY48 417 aaPredicted RBP6.65□□□□□ -1.34
RPN1-203ENST00000479113 PHLDB1Q86UU1 1377 aa6.65□□□□□ -1.35
RPN1-203ENST00000479113 MAGI3Q5TCQ9 1506 aa6.65□□□□□ -1.35
RPN1-203ENST00000479113 MAP3K4Q9Y6R4 1608 aa6.65□□□□□ -1.35
RPN1-203ENST00000479113 GGCXP38435 758 aa6.64□□□□□ -1.35
RPN1-203ENST00000479113 IL27Q8NEV9 243 aa6.64□□□□□ -1.35
RPN1-203ENST00000479113 HLA-CQ95604 372 aa6.64□□□□□ -1.35
RPN1-203ENST00000479113 PUS10Q3MIT2 529 aaKnown RBP6.63□□□□□ -1.35
RPN1-203ENST00000479113 EFCAB2Q5VUJ9 269 aa6.63□□□□□ -1.35
RPN1-203ENST00000479113 FMN1Q68DA7 1419 aa6.63□□□□□ -1.35
RPN1-203ENST00000479113 TBC1D2Q9BYX2 928 aa6.63□□□□□ -1.35
RPN1-203ENST00000479113 CFAP43Q8NDM7 1665 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 SAMD9Q5K651 1589 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 NUP153P49790 1475 aaKnown RBP6.62□□□□□ -1.35
RPN1-203ENST00000479113 ATP6V1AP38606 617 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 MORN1Q5T089 497 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 BLOC1S3Q6QNY0 202 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 NUTM1Q86Y26 1132 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 DDRGK1Q96HY6 314 aa6.62□□□□□ -1.35
RPN1-203ENST00000479113 ESF1Q9H501 851 aaKnown RBP6.62□□□□□ -1.35
RPN1-203ENST00000479113 MOXD2PA6NHM9 499 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 HOXA2O43364 376 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 NDUFV2P19404 249 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 USP46P62068 366 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
RPN1-203ENST00000479113 KIF21BO75037 1637 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 RAPGEF6Q8TEU7 1601 aa6.61□□□□□ -1.35
RPN1-203ENST00000479113 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 DENND4BO75064 1496 aaPredicted RBP6.6□□□□□ -1.35
RPN1-203ENST00000479113 CLIP1P30622 1438 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 AKNAQ7Z591 1439 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 GFRA3O60609 400 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 MYSM1Q5VVJ2 828 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 SLC27A5Q9Y2P5 690 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 FANCAO15360 1455 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 NEO1Q92859 1461 aa6.6□□□□□ -1.35
RPN1-203ENST00000479113 POGZQ7Z3K3 1410 aa6.59□□□□□ -1.35
RPN1-203ENST00000479113 SCUBE3Q8IX30 993 aa6.59□□□□□ -1.35
RPN1-203ENST00000479113 PCDHGC3Q9UN70 934 aa6.59□□□□□ -1.35
RPN1-203ENST00000479113 ARAP3Q8WWN8 1544 aa6.59□□□□□ -1.35
RPN1-203ENST00000479113 SCAPERQ9BY12 1400 aa6.59□□□□□ -1.36
RPN1-203ENST00000479113 SPTLC1O15269 473 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 NR1I2O75469 434 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 RSBN1LQ6PCB5 846 aaPredicted RBP6.58□□□□□ -1.36
RPN1-203ENST00000479113 RIC3Q7Z5B4 369 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
RPN1-203ENST00000479113 CDK13Q14004 1512 aaKnown RBP6.57□□□□□ -1.36
RPN1-203ENST00000479113 RNF223E7ERA6 249 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 FDX1P10109 184 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 DIXDC1Q155Q3 683 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 GRIPAP1Q4V328 841 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 AFAP1Q8N556 730 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 RSPH6AQ9H0K4 717 aa6.57□□□□□ -1.36
RPN1-203ENST00000479113 ARHGAP35Q9NRY4 1499 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 NRG2O14511 850 aaPredicted RBP6.56□□□□□ -1.36
RPN1-203ENST00000479113 TLL1O43897 1013 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
RPN1-203ENST00000479113 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 BRICD5Q6PL45 260 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 TRAF7Q6Q0C0 670 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 RNF19BQ6ZMZ0 732 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 PROCA1Q8NCQ7 364 aaPredicted RBP6.56□□□□□ -1.36
RPN1-203ENST00000479113 ABCA9Q8IUA7 1624 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 PLCH2O75038 1416 aa6.56□□□□□ -1.36
RPN1-203ENST00000479113 GJA5P36382 358 aa6.55□□□□□ -1.36
RPN1-203ENST00000479113 SLC19A1P41440 591 aa6.55□□□□□ -1.36
RPN1-203ENST00000479113 CLK2P49760 499 aaKnown RBP6.55□□□□□ -1.36
RPN1-203ENST00000479113 FBXO31Q5XUX0 539 aaPredicted RBP6.55□□□□□ -1.36
RPN1-203ENST00000479113 ANKLE1Q8NAG6 615 aa6.55□□□□□ -1.36
RPN1-203ENST00000479113 SYMPKQ92797 1274 aaKnown RBP6.55□□□□□ -1.36
RPN1-203ENST00000479113 CFDP1Q9UEE9 299 aaPredicted RBP6.55□□□□□ -1.36
RPN1-203ENST00000479113 ARHGAP5Q13017 1502 aa6.55□□□□□ -1.36
RPN1-203ENST00000479113 TROQ12816 1431 aaPredicted RBP6.54□□□□□ -1.36
RPN1-203ENST00000479113 ADH1BP00325 375 aa6.54□□□□□ -1.36
RPN1-203ENST00000479113 HSPA2P54652 639 aa6.54□□□□□ -1.36
RPN1-203ENST00000479113 SALL2Q9Y467 1007 aaPredicted RBP6.54□□□□□ -1.36
RPN1-203ENST00000479113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.54□□□□□ -1.36
RPN1-203ENST00000479113 MTUS2Q5JR59 1369 aa6.54□□□□□ -1.36
RPN1-203ENST00000479113 HECW1Q76N89 1606 aa6.54□□□□□ -1.36
RPN1-203ENST00000479113 PTPRMP28827 1452 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 1200.7 ms