RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 FOXO3O43524 673 aa12□□□□□ -0.49
ERCC8-205ENST00000477893 PLEKHG5O94827 1062 aa12□□□□□ -0.49
ERCC8-205ENST00000477893 POTEJP0CG39 1038 aa12□□□□□ -0.49
ERCC8-205ENST00000477893 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
ERCC8-205ENST00000477893 ADAMTS2O95450 1211 aa11.99□□□□□ -0.49
ERCC8-205ENST00000477893 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
ERCC8-205ENST00000477893 SOS2Q07890 1332 aaPredicted RBP11.98□□□□□ -0.49
ERCC8-205ENST00000477893 NPHP3Q7Z494 1330 aa11.98□□□□□ -0.49
ERCC8-205ENST00000477893 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
ERCC8-205ENST00000477893 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
ERCC8-205ENST00000477893 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
ERCC8-205ENST00000477893 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
ERCC8-205ENST00000477893 PXDNQ92626 1479 aa11.96□□□□□ -0.49
ERCC8-205ENST00000477893 AFF2P51816 1311 aa11.96□□□□□ -0.49
ERCC8-205ENST00000477893 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
ERCC8-205ENST00000477893 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
ERCC8-205ENST00000477893 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
ERCC8-205ENST00000477893 C7P10643 843 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
ERCC8-205ENST00000477893 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
ERCC8-205ENST00000477893 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 SLC39A7Q92504 469 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
ERCC8-205ENST00000477893 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
ERCC8-205ENST00000477893 ADGRB2O60241 1585 aa11.94□□□□□ -0.5
ERCC8-205ENST00000477893 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
ERCC8-205ENST00000477893 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
ERCC8-205ENST00000477893 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
ERCC8-205ENST00000477893 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
ERCC8-205ENST00000477893 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
ERCC8-205ENST00000477893 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
ERCC8-205ENST00000477893 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
ERCC8-205ENST00000477893 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
ERCC8-205ENST00000477893 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
ERCC8-205ENST00000477893 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
ERCC8-205ENST00000477893 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
ERCC8-205ENST00000477893 PSME1Q06323 249 aa11.91□□□□□ -0.5
ERCC8-205ENST00000477893 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
ERCC8-205ENST00000477893 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
ERCC8-205ENST00000477893 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
ERCC8-205ENST00000477893 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-205ENST00000477893 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-205ENST00000477893 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-205ENST00000477893 TNS3Q68CZ2 1445 aa11.9□□□□□ -0.5
ERCC8-205ENST00000477893 EIF3AQ14152 1382 aaKnown RBP11.9□□□□□ -0.5
ERCC8-205ENST00000477893 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
ERCC8-205ENST00000477893 RXRBP28702 533 aa11.89□□□□□ -0.51
ERCC8-205ENST00000477893 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
ERCC8-205ENST00000477893 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
ERCC8-205ENST00000477893 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
ERCC8-205ENST00000477893 USP21Q9UK80 565 aa11.88□□□□□ -0.51
ERCC8-205ENST00000477893 ROCK2O75116 1388 aaKnown RBP11.88□□□□□ -0.51
ERCC8-205ENST00000477893 ATP7BP35670 1465 aa11.88□□□□□ -0.51
ERCC8-205ENST00000477893 CENPJQ9HC77 1338 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-205ENST00000477893 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
ERCC8-205ENST00000477893 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
ERCC8-205ENST00000477893 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
ERCC8-205ENST00000477893 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
ERCC8-205ENST00000477893 GPRASP1Q5JY77 1395 aa11.87□□□□□ -0.51
ERCC8-205ENST00000477893 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
ERCC8-205ENST00000477893 QRICH2Q9H0J4 1663 aa11.86□□□□□ -0.51
ERCC8-205ENST00000477893 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
ERCC8-205ENST00000477893 NBPF8Q3BBV2 869 aa11.85□□□□□ -0.51
ERCC8-205ENST00000477893 CABP2Q9NPB3 220 aa11.85□□□□□ -0.51
ERCC8-205ENST00000477893 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
ERCC8-205ENST00000477893 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
ERCC8-205ENST00000477893 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
ERCC8-205ENST00000477893 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
ERCC8-205ENST00000477893 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
ERCC8-205ENST00000477893 RGS12O14924 1447 aa11.84□□□□□ -0.51
ERCC8-205ENST00000477893 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
ERCC8-205ENST00000477893 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
ERCC8-205ENST00000477893 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.52
ERCC8-205ENST00000477893 NUTM2GQ5VZR2 741 aa11.83□□□□□ -0.52
ERCC8-205ENST00000477893 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
ERCC8-205ENST00000477893 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
ERCC8-205ENST00000477893 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
ERCC8-205ENST00000477893 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
ERCC8-205ENST00000477893 ATRNO75882 1429 aa11.81□□□□□ -0.52
ERCC8-205ENST00000477893 FNBP4Q8N3X1 1017 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-205ENST00000477893 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
ERCC8-205ENST00000477893 BCL9LQ86UU0 1499 aa11.81□□□□□ -0.52
ERCC8-205ENST00000477893 ACEP12821 1306 aa11.81□□□□□ -0.52
ERCC8-205ENST00000477893 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
ERCC8-205ENST00000477893 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
ERCC8-205ENST00000477893 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
ERCC8-205ENST00000477893 ALS2Q96Q42 1657 aa11.8□□□□□ -0.52
ERCC8-205ENST00000477893 PLCH1Q4KWH8 1693 aa11.79□□□□□ -0.52
ERCC8-205ENST00000477893 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
ERCC8-205ENST00000477893 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
ERCC8-205ENST00000477893 SLIT2O94813 1529 aa11.78□□□□□ -0.52
ERCC8-205ENST00000477893 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
ERCC8-205ENST00000477893 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
ERCC8-205ENST00000477893 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
ERCC8-205ENST00000477893 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
ERCC8-205ENST00000477893 A0A0G2JS52 829 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms