RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LRPPRCP42704 1394 aaKnown RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 SMARCA4P51532 1647 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 ERICH4A6NGS2 130 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 GTF2A1P52655 376 aaPredicted RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 LRSAM1Q6UWE0 723 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 TNMDQ9H2S6 317 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 RRP7AQ9Y3A4 280 aaKnown RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 SYCE3A1L190 88 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 PES1O00541 588 aaKnown RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 CHD1LQ86WJ1 897 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 SMARCE1Q969G3 411 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 NOL7Q9UMY1 257 aaKnown RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 PIP4K2AP48426 406 aaPredicted RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 ANKRD1Q15327 319 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 ZNF396Q96N95 335 aaPredicted RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 NKTRP30414 1462 aaKnown RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 NOLC1Q14978 699 aaKnown RBP eCLIP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 RRP12Q5JTH9 1297 aaKnown RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 IQCEQ6IPM2 695 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 SAMD1Q6SPF0 538 aaPredicted RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 SPC24Q8NBT2 197 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 SDF4Q9BRK5 362 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 NUP62CLQ9H1M0 184 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 EFCAB5A4FU69 1503 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 HIP1O00291 1037 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 ZSCAN12O43309 604 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 BAG4O95429 457 aaKnown RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 HDGFP51858 240 aaKnown RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 GSDMDP57764 484 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 TUBB4BP68371 445 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 MAP3K11Q16584 847 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 TTLL5Q6EMB2 1281 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 CCDC47Q96A33 483 aaKnown RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 MYO6Q9UM54 1294 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 TNNT1P13805 278 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 MICALCLQ6ZW33 695 aa5.95□□□□□ -1.46
PCDH9-203ENST00000456367 V9GYY5 206 aaPredicted RBP5.95□□□□□ -1.46
PCDH9-203ENST00000456367 RNF123Q5XPI4 1314 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SHTN1A0MZ66 631 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 ZRSR2Q15696 482 aaKnown RBP5.94□□□□□ -1.46
PCDH9-203ENST00000456367 MAP9Q49MG5 647 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 JAKMIP3Q5VZ66 844 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 CEP57L1Q8IYX8 460 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SRCIN1Q9C0H9 1055 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SMTNL1A8MU46 457 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SLC4A10Q6U841 1118 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 EVC2Q86UK5 1308 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 NCOA2Q15596 1464 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 PRXQ9BXM0 1461 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 TRIM29Q14134 588 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 FILIP1LQ4L180 1135 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 ATF7IPQ6VMQ6 1270 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 KIAA1107Q9UPP5 1409 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SYNE3Q6ZMZ3 975 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 SMC5Q8IY18 1101 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 INCENPQ9NQS7 918 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
PCDH9-203ENST00000456367 CTAGE5O15320 804 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 DIAPH1O60610 1272 aaKnown RBP5.93□□□□□ -1.46
PCDH9-203ENST00000456367 BCAR3O75815 825 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 SMC2O95347 1197 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 RIPK4P57078 832 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 ZSCAN23Q3MJ62 389 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 C8orf34Q49A92 452 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 SRRTQ9BXP5 876 aaKnown RBP5.93□□□□□ -1.46
PCDH9-203ENST00000456367 CFAP45Q9UL16 551 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 FIBPO43427 364 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 TCP11L2Q8N4U5 519 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 ZNF397Q8NF99 534 aaPredicted RBP5.93□□□□□ -1.46
PCDH9-203ENST00000456367 PPP6R1Q9UPN7 881 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 CNTROBQ8N137 903 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 MYRIPQ8NFW9 859 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 PANK2Q9BZ23 570 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 ZMYM3Q14202 1370 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 GNAI3P08754 354 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 HSP90AB3PQ58FF7 597 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 CEP89Q96ST8 783 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 CHMP3Q9Y3E7 222 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 GPRASP1Q5JY77 1395 aa5.93□□□□□ -1.46
PCDH9-203ENST00000456367 INSRP06213 1382 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 BMP2KLQ5H9B9 411 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 GORABQ5T7V8 394 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 JMYQ8N9B5 988 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 CAGE1Q8TC20 777 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 SCAND2PQ9GZW5 306 aaPredicted RBP5.92□□□□□ -1.46
PCDH9-203ENST00000456367 RASSF4Q9H2L5 321 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 EHBP1L1Q8N3D4 1523 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 GOLGA6L10A6NI86 522 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 CLGNO14967 610 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 SSFA2P28290 1259 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 GTF2F1P35269 517 aaKnown RBP eCLIP5.92□□□□□ -1.46
PCDH9-203ENST00000456367 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 CCDC91Q7Z6B0 441 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 TUBBP07437 444 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
PCDH9-203ENST00000456367 DDX19AQ9NUU7 478 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms