RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
TRIM4-204ENST00000447480 PRKRIP1Q9H875 184 aaPredicted RBP10.14□□□□□ -0.79
TRIM4-204ENST00000447480 LMTK3Q96Q04 1460 aa10.14□□□□□ -0.79
TRIM4-204ENST00000447480 ARHGAP23Q9P227 1491 aa10.14□□□□□ -0.79
TRIM4-204ENST00000447480 SPATA31E1Q6ZUB1 1445 aa10.14□□□□□ -0.79
TRIM4-204ENST00000447480 RIMS2Q9UQ26 1411 aa10.14□□□□□ -0.79
TRIM4-204ENST00000447480 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
TRIM4-204ENST00000447480 G3V3G9 751 aa10.12□□□□□ -0.79
TRIM4-204ENST00000447480 MS4A1P11836 297 aa10.12□□□□□ -0.79
TRIM4-204ENST00000447480 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
TRIM4-204ENST00000447480 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
TRIM4-204ENST00000447480 TXNDC2Q86VQ3 553 aa10.12□□□□□ -0.79
TRIM4-204ENST00000447480 PLEKHG1Q9ULL1 1385 aa10.12□□□□□ -0.79
TRIM4-204ENST00000447480 MED14O60244 1454 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 WASHC2AQ641Q2 1341 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
TRIM4-204ENST00000447480 PPM1GO15355 546 aaPredicted RBP10.11□□□□□ -0.79
TRIM4-204ENST00000447480 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 IQGAP1P46940 1657 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 NEXMIFQ5QGS0 1516 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 PIK3R4Q99570 1358 aa10.11□□□□□ -0.79
TRIM4-204ENST00000447480 TCERG1O14776 1098 aaKnown RBP10.1□□□□□ -0.79
TRIM4-204ENST00000447480 RGL3Q3MIN7 710 aa10.1□□□□□ -0.79
TRIM4-204ENST00000447480 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
TRIM4-204ENST00000447480 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
TRIM4-204ENST00000447480 INSRP06213 1382 aa10.1□□□□□ -0.79
TRIM4-204ENST00000447480 CCDC7Q96M83 1385 aa10.1□□□□□ -0.79
TRIM4-204ENST00000447480 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
TRIM4-204ENST00000447480 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
TRIM4-204ENST00000447480 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
TRIM4-204ENST00000447480 DCAF11Q8TEB1 546 aa10.09□□□□□ -0.79
TRIM4-204ENST00000447480 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
TRIM4-204ENST00000447480 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
TRIM4-204ENST00000447480 NPHP4O75161 1426 aaPredicted RBP10.08□□□□□ -0.8
TRIM4-204ENST00000447480 NUDCQ9Y266 331 aa10.08□□□□□ -0.8
TRIM4-204ENST00000447480 PDE3BQ13370 1112 aa10.07□□□□□ -0.8
TRIM4-204ENST00000447480 NRXN1Q9ULB1 1477 aa10.06□□□□□ -0.8
TRIM4-204ENST00000447480 EIF3AQ14152 1382 aaKnown RBP10.06□□□□□ -0.8
TRIM4-204ENST00000447480 PPP1R37O75864 691 aa10.06□□□□□ -0.8
TRIM4-204ENST00000447480 MRS2Q9HD23 443 aa10.06□□□□□ -0.8
TRIM4-204ENST00000447480 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
TRIM4-204ENST00000447480 PIK3C2GO75747 1445 aa10.06□□□□□ -0.8
TRIM4-204ENST00000447480 L3MBTL2Q969R5 705 aa10.05□□□□□ -0.8
TRIM4-204ENST00000447480 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
TRIM4-204ENST00000447480 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
TRIM4-204ENST00000447480 STRCQ7RTU9 1775 aa10.04□□□□□ -0.8
TRIM4-204ENST00000447480 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
TRIM4-204ENST00000447480 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
TRIM4-204ENST00000447480 ALKQ9UM73 1620 aa10.03□□□□□ -0.8
TRIM4-204ENST00000447480 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.81
TRIM4-204ENST00000447480 NKTRP30414 1462 aaKnown RBP10.02□□□□□ -0.81
TRIM4-204ENST00000447480 CPS1P31327 1500 aa10.02□□□□□ -0.81
TRIM4-204ENST00000447480 KNDC1Q76NI1 1749 aa10.02□□□□□ -0.81
TRIM4-204ENST00000447480 TRPM1Q7Z4N2 1603 aa10.01□□□□□ -0.81
TRIM4-204ENST00000447480 CHD2O14647 1828 aaKnown RBP10.01□□□□□ -0.81
TRIM4-204ENST00000447480 LTKP29376 864 aa10.01□□□□□ -0.81
TRIM4-204ENST00000447480 HSPA2P54652 639 aa10.01□□□□□ -0.81
TRIM4-204ENST00000447480 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
TRIM4-204ENST00000447480 RALGAPBQ86X10 1494 aa10.01□□□□□ -0.81
TRIM4-204ENST00000447480 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
TRIM4-204ENST00000447480 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
TRIM4-204ENST00000447480 SIRT1Q96EB6 747 aa10□□□□□ -0.81
TRIM4-204ENST00000447480 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
TRIM4-204ENST00000447480 DLC1Q96QB1 1528 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
TRIM4-204ENST00000447480 KCNA6P17658 529 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 RALBP1Q15311 655 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 RYDENQ9NUL5 291 aaKnown RBP9.99□□□□□ -0.81
TRIM4-204ENST00000447480 NWD1Q149M9 1564 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 ADGRF5Q8IZF2 1346 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 NRXN3Q9Y4C0 1643 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 SETD1AO15047 1707 aaKnown RBP9.99□□□□□ -0.81
TRIM4-204ENST00000447480 PTCH1Q13635 1447 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
TRIM4-204ENST00000447480 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
TRIM4-204ENST00000447480 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
TRIM4-204ENST00000447480 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
TRIM4-204ENST00000447480 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
TRIM4-204ENST00000447480 GPRASP1Q5JY77 1395 aa9.98□□□□□ -0.81
TRIM4-204ENST00000447480 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
TRIM4-204ENST00000447480 TECPR2O15040 1411 aa9.98□□□□□ -0.81
TRIM4-204ENST00000447480 FAM135BQ49AJ0 1406 aa9.98□□□□□ -0.81
TRIM4-204ENST00000447480 IQSEC2Q5JU85 1478 aa9.98□□□□□ -0.81
TRIM4-204ENST00000447480 CARD11Q9BXL7 1154 aa9.97□□□□□ -0.81
TRIM4-204ENST00000447480 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
TRIM4-204ENST00000447480 CDCA8Q53HL2 280 aa9.96□□□□□ -0.82
TRIM4-204ENST00000447480 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
TRIM4-204ENST00000447480 FAM9BQ8IZU0 186 aa9.96□□□□□ -0.82
TRIM4-204ENST00000447480 PNISRQ8TF01 805 aaKnown RBP9.96□□□□□ -0.82
TRIM4-204ENST00000447480 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.82
TRIM4-204ENST00000447480 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.82
TRIM4-204ENST00000447480 SLC26A8Q96RN1 970 aa9.95□□□□□ -0.82
TRIM4-204ENST00000447480 POGKQ9P215 609 aa9.95□□□□□ -0.82
TRIM4-204ENST00000447480 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
TRIM4-204ENST00000447480 IRX6P78412 446 aaPredicted RBP9.94□□□□□ -0.82
TRIM4-204ENST00000447480 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
TRIM4-204ENST00000447480 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
TRIM4-204ENST00000447480 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
TRIM4-204ENST00000447480 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms