RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
HERPUD1-204ENST00000439977 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-204ENST00000439977 MLECQ14165 292 aa17.24■□□□□ 0.35
HERPUD1-204ENST00000439977 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
HERPUD1-204ENST00000439977 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
HERPUD1-204ENST00000439977 NSD2O96028 1365 aa17.24■□□□□ 0.35
HERPUD1-204ENST00000439977 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
HERPUD1-204ENST00000439977 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 ATF7IPQ6VMQ6 1270 aa17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 CAMSAP1Q5T5Y3 1602 aa17.23■□□□□ 0.35
HERPUD1-204ENST00000439977 BECN1Q14457 450 aa17.22■□□□□ 0.35
HERPUD1-204ENST00000439977 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
HERPUD1-204ENST00000439977 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 ARHGEF28Q8N1W1 1705 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-204ENST00000439977 ARXQ96QS3 562 aa17.19■□□□□ 0.34
HERPUD1-204ENST00000439977 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
HERPUD1-204ENST00000439977 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
HERPUD1-204ENST00000439977 AAMPQ13685 434 aa17.19■□□□□ 0.34
HERPUD1-204ENST00000439977 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
HERPUD1-204ENST00000439977 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
HERPUD1-204ENST00000439977 LNPKQ9C0E8 428 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 PIK3C2BO00750 1634 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 PTPRMP28827 1452 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
HERPUD1-204ENST00000439977 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
HERPUD1-204ENST00000439977 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
HERPUD1-204ENST00000439977 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-204ENST00000439977 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
HERPUD1-204ENST00000439977 NEO1Q92859 1461 aa17.14■□□□□ 0.34
HERPUD1-204ENST00000439977 NME9Q86XW9 330 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 CFAP74Q9C0B2 1584 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
HERPUD1-204ENST00000439977 FCHSD2O94868 740 aa17.13■□□□□ 0.33
HERPUD1-204ENST00000439977 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-204ENST00000439977 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
HERPUD1-204ENST00000439977 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-204ENST00000439977 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
HERPUD1-204ENST00000439977 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-204ENST00000439977 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
HERPUD1-204ENST00000439977 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-204ENST00000439977 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
HERPUD1-204ENST00000439977 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
HERPUD1-204ENST00000439977 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
HERPUD1-204ENST00000439977 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 MYO5BQ9ULV0 1848 aa17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 IL16Q14005 1332 aa17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 GZF1Q9H116 711 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-204ENST00000439977 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-204ENST00000439977 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
HERPUD1-204ENST00000439977 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
HERPUD1-204ENST00000439977 VAMP4O75379 141 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 NFE2L2Q16236 605 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 ARHGEF40Q8TER5 1519 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 TMEM131LA2VDJ0 1609 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 SOX12O15370 315 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
HERPUD1-204ENST00000439977 NUCB1Q02818 461 aa17.06■□□□□ 0.32
HERPUD1-204ENST00000439977 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
HERPUD1-204ENST00000439977 ALKQ9UM73 1620 aa17.06■□□□□ 0.32
HERPUD1-204ENST00000439977 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
HERPUD1-204ENST00000439977 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-204ENST00000439977 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
HERPUD1-204ENST00000439977 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-204ENST00000439977 IL13P35225 146 aa17.04■□□□□ 0.32
HERPUD1-204ENST00000439977 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
HERPUD1-204ENST00000439977 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-204ENST00000439977 LRRC7Q96NW7 1537 aa17.04■□□□□ 0.32
HERPUD1-204ENST00000439977 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
HERPUD1-204ENST00000439977 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-204ENST00000439977 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-204ENST00000439977 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-204ENST00000439977 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
HERPUD1-204ENST00000439977 COG3Q96JB2 828 aa17.02■□□□□ 0.32
HERPUD1-204ENST00000439977 PREX1Q8TCU6 1659 aa17.02■□□□□ 0.32
HERPUD1-204ENST00000439977 METP08581 1390 aa17.02■□□□□ 0.32
HERPUD1-204ENST00000439977 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.31
HERPUD1-204ENST00000439977 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.31
HERPUD1-204ENST00000439977 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
HERPUD1-204ENST00000439977 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
HERPUD1-204ENST00000439977 GNAI1P63096 354 aa17.01■□□□□ 0.31
HERPUD1-204ENST00000439977 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
HERPUD1-204ENST00000439977 MED14O60244 1454 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms