RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SSFA2P28290 1259 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 OFD1O75665 1012 aa9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 EIF2AK4Q9P2K8 1649 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 RUNDC1Q96C34 613 aa9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 CDC42BPBQ9Y5S2 1711 aa9.16□□□□□ -0.94
SYNPO2-203ENST00000434046 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
SYNPO2-203ENST00000434046 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
SYNPO2-203ENST00000434046 GPRASP1Q5JY77 1395 aa9.15□□□□□ -0.94
SYNPO2-203ENST00000434046 CROCC2H7BZ55 1655 aa9.15□□□□□ -0.94
SYNPO2-203ENST00000434046 ANKRD45Q5TZF3 282 aa9.15□□□□□ -0.95
SYNPO2-203ENST00000434046 PLA2R1Q13018 1463 aa9.15□□□□□ -0.95
SYNPO2-203ENST00000434046 NSD3Q9BZ95 1437 aa9.15□□□□□ -0.95
SYNPO2-203ENST00000434046 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 TCP11L2Q8N4U5 519 aa9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 COL17A1Q9UMD9 1497 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
SYNPO2-203ENST00000434046 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 MVPQ14764 893 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 COG3Q96JB2 828 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 MAP3K4Q9Y6R4 1608 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 KIAA2012Q0VF49 1180 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 NGDNQ8NEJ9 315 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 CDK19Q9BWU1 502 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 ABCA9Q8IUA7 1624 aa9.13□□□□□ -0.95
SYNPO2-203ENST00000434046 APBB1O00213 710 aa9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 MTERF4Q7Z6M4 381 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 TXNDC2Q86VQ3 553 aa9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 CFAP65Q6ZU64 1925 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 ATP10AO60312 1499 aa9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 K7ELQ4 463 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 CBX1P83916 185 aa9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 POLR1AO95602 1720 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-203ENST00000434046 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 POGZQ7Z3K3 1410 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 CDK11BP21127 795 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 AAMPQ13685 434 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 DDX19BQ9UMR2 479 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 ZNF521Q96K83 1311 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 RIPK4P57078 832 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 NEO1Q92859 1461 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 IPO8O15397 1037 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-203ENST00000434046 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 BAG4O95429 457 aaKnown RBP9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 RAB3GAP1Q15042 981 aa9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 WAPLQ7Z5K2 1190 aa9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 CCDC39Q9UFE4 941 aa9.1□□□□□ -0.95
SYNPO2-203ENST00000434046 KCNA4P22459 653 aa9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 SYCE3A1L190 88 aa9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 KLHL40Q2TBA0 621 aa9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 SASS6Q6UVJ0 657 aa9.09□□□□□ -0.95
SYNPO2-203ENST00000434046 DYNC1I1O14576 645 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 HMOX1P09601 288 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 NUCB2P80303 420 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 GAS2L2Q8NHY3 880 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 NPATQ14207 1427 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 IQGAP3Q86VI3 1631 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 ELL2O00472 640 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 CHAF1AQ13111 956 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 ZSCAN23Q3MJ62 389 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 SMC5Q8IY18 1101 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 RTF1Q92541 710 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 TSC1Q92574 1164 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 SLC26A8Q96RN1 970 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 FAM177BA6PVY3 158 aa9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 PRIM1P49642 420 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 CHMP4BQ9H444 224 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-203ENST00000434046 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 SMAP1Q8IYB5 467 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 PPP1R9BQ96SB3 815 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 PPP6R1Q9UPN7 881 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 UNC13BO14795 1591 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 AMPHP49418 695 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 ZNF771Q7L3S4 317 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 NOB1Q9ULX3 412 aaKnown RBP9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 ZKSCAN5Q9Y2L8 839 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 IGSF3O75054 1194 aa9.07□□□□□ -0.96
SYNPO2-203ENST00000434046 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms