RNA–Protein interactions for RNA: ENST00000415906.1

LPP-202, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 2

Gene LPP, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-202ENST00000415906 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
LPP-202ENST00000415906 IER5LQ5T953 404 aa12.79□□□□□ -0.36
LPP-202ENST00000415906 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
LPP-202ENST00000415906 PPLO60437 1756 aa12.79□□□□□ -0.36
LPP-202ENST00000415906 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
LPP-202ENST00000415906 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
LPP-202ENST00000415906 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
LPP-202ENST00000415906 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
LPP-202ENST00000415906 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
LPP-202ENST00000415906 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
LPP-202ENST00000415906 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.37
LPP-202ENST00000415906 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
LPP-202ENST00000415906 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
LPP-202ENST00000415906 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
LPP-202ENST00000415906 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
LPP-202ENST00000415906 AFF2P51816 1311 aa12.75□□□□□ -0.37
LPP-202ENST00000415906 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
LPP-202ENST00000415906 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
LPP-202ENST00000415906 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
LPP-202ENST00000415906 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
LPP-202ENST00000415906 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
LPP-202ENST00000415906 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
LPP-202ENST00000415906 CFAP70Q5T0N1 1121 aa12.74□□□□□ -0.37
LPP-202ENST00000415906 C8orf37Q96NL8 207 aa12.74□□□□□ -0.37
LPP-202ENST00000415906 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
LPP-202ENST00000415906 RXRBP28702 533 aa12.73□□□□□ -0.37
LPP-202ENST00000415906 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
LPP-202ENST00000415906 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
LPP-202ENST00000415906 TECPR2O15040 1411 aa12.72□□□□□ -0.37
LPP-202ENST00000415906 FOXO3O43524 673 aa12.72□□□□□ -0.37
LPP-202ENST00000415906 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
LPP-202ENST00000415906 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
LPP-202ENST00000415906 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
LPP-202ENST00000415906 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
LPP-202ENST00000415906 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
LPP-202ENST00000415906 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
LPP-202ENST00000415906 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
LPP-202ENST00000415906 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
LPP-202ENST00000415906 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
LPP-202ENST00000415906 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
LPP-202ENST00000415906 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
LPP-202ENST00000415906 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
LPP-202ENST00000415906 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
LPP-202ENST00000415906 LAMC1P11047 1609 aa12.67□□□□□ -0.38
LPP-202ENST00000415906 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
LPP-202ENST00000415906 MYOM2P54296 1465 aa12.66□□□□□ -0.38
LPP-202ENST00000415906 PSEN1P49768 467 aa12.66□□□□□ -0.38
LPP-202ENST00000415906 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
LPP-202ENST00000415906 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
LPP-202ENST00000415906 PXDNQ92626 1479 aa12.65□□□□□ -0.38
LPP-202ENST00000415906 SEC24BO95487 1268 aa12.65□□□□□ -0.38
LPP-202ENST00000415906 RBM6P78332 1123 aaKnown RBP12.65□□□□□ -0.38
LPP-202ENST00000415906 MAMSTRQ6ZN01 415 aa12.65□□□□□ -0.38
LPP-202ENST00000415906 USP21Q9UK80 565 aa12.65□□□□□ -0.38
LPP-202ENST00000415906 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
LPP-202ENST00000415906 POGKQ9P215 609 aa12.64□□□□□ -0.39
LPP-202ENST00000415906 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
LPP-202ENST00000415906 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
LPP-202ENST00000415906 RGS12O14924 1447 aa12.63□□□□□ -0.39
LPP-202ENST00000415906 HRCP23327 699 aa12.63□□□□□ -0.39
LPP-202ENST00000415906 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
LPP-202ENST00000415906 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
LPP-202ENST00000415906 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
LPP-202ENST00000415906 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
LPP-202ENST00000415906 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
LPP-202ENST00000415906 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
LPP-202ENST00000415906 PMFBP1Q8TBY8 1022 aa12.61□□□□□ -0.39
LPP-202ENST00000415906 TRPC5Q9UL62 973 aaPredicted RBP12.61□□□□□ -0.39
LPP-202ENST00000415906 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
LPP-202ENST00000415906 ADGRB1O14514 1584 aa12.6□□□□□ -0.39
LPP-202ENST00000415906 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
LPP-202ENST00000415906 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
LPP-202ENST00000415906 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
LPP-202ENST00000415906 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
LPP-202ENST00000415906 ATRNO75882 1429 aa12.59□□□□□ -0.39
LPP-202ENST00000415906 PSME1Q06323 249 aa12.58□□□□□ -0.4
LPP-202ENST00000415906 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
LPP-202ENST00000415906 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
LPP-202ENST00000415906 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
LPP-202ENST00000415906 PLCG2P16885 1265 aa12.57□□□□□ -0.4
LPP-202ENST00000415906 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
LPP-202ENST00000415906 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
LPP-202ENST00000415906 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
LPP-202ENST00000415906 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
LPP-202ENST00000415906 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
LPP-202ENST00000415906 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
LPP-202ENST00000415906 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
LPP-202ENST00000415906 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
LPP-202ENST00000415906 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
LPP-202ENST00000415906 RGPD8O14715 1765 aaPredicted RBP12.55□□□□□ -0.4
LPP-202ENST00000415906 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
LPP-202ENST00000415906 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
LPP-202ENST00000415906 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
LPP-202ENST00000415906 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
LPP-202ENST00000415906 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
LPP-202ENST00000415906 SLIT2O94813 1529 aa12.52□□□□□ -0.4
LPP-202ENST00000415906 ADGRB2O60241 1585 aa12.52□□□□□ -0.4
LPP-202ENST00000415906 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.41
LPP-202ENST00000415906 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
LPP-202ENST00000415906 FAM83GA6ND36 823 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms