RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 KDM4AO75164 1064 aa8.1□□□□□ -1.11
PTPRK-210ENST00000415055 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
PTPRK-210ENST00000415055 WRNQ14191 1432 aaPredicted RBP eCLIP8.1□□□□□ -1.11
PTPRK-210ENST00000415055 CYP4X1Q8N118 509 aa8.09□□□□□ -1.11
PTPRK-210ENST00000415055 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
PTPRK-210ENST00000415055 POTECB2RU33 542 aa8.08□□□□□ -1.12
PTPRK-210ENST00000415055 ST8SIA5O15466 376 aa8.08□□□□□ -1.12
PTPRK-210ENST00000415055 MMP16P51512 607 aa8.08□□□□□ -1.12
PTPRK-210ENST00000415055 USP46P62068 366 aa8.08□□□□□ -1.12
PTPRK-210ENST00000415055 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-210ENST00000415055 CRIPAKQ8N1N5 446 aa8.07□□□□□ -1.12
PTPRK-210ENST00000415055 USB1Q9BQ65 265 aaKnown RBP8.07□□□□□ -1.12
PTPRK-210ENST00000415055 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
PTPRK-210ENST00000415055 AVPP01185 164 aa8.06□□□□□ -1.12
PTPRK-210ENST00000415055 CCDC102AQ96A19 550 aa8.06□□□□□ -1.12
PTPRK-210ENST00000415055 RUSC2Q8N2Y8 1516 aa8.06□□□□□ -1.12
PTPRK-210ENST00000415055 FBXO41Q8TF61 875 aa8.05□□□□□ -1.12
PTPRK-210ENST00000415055 TTC24A2A3L6 582 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-210ENST00000415055 WNT7AO00755 349 aa8.04□□□□□ -1.12
PTPRK-210ENST00000415055 HOXA2O43364 376 aa8.04□□□□□ -1.12
PTPRK-210ENST00000415055 DXOO77932 396 aaKnown RBP8.04□□□□□ -1.12
PTPRK-210ENST00000415055 CLCN1P35523 988 aa8.04□□□□□ -1.12
PTPRK-210ENST00000415055 TRIM32Q13049 653 aa8.04□□□□□ -1.12
PTPRK-210ENST00000415055 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
PTPRK-210ENST00000415055 GPCPD1Q9NPB8 672 aa8.04□□□□□ -1.12
PTPRK-210ENST00000415055 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
PTPRK-210ENST00000415055 PPRC1Q5VV67 1664 aaKnown RBP8.03□□□□□ -1.12
PTPRK-210ENST00000415055 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
PTPRK-210ENST00000415055 HLA-CQ95604 372 aa8.03□□□□□ -1.12
PTPRK-210ENST00000415055 CUL7Q14999 1698 aa8.02□□□□□ -1.13
PTPRK-210ENST00000415055 AXIN1O15169 862 aa8.02□□□□□ -1.13
PTPRK-210ENST00000415055 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
PTPRK-210ENST00000415055 SNIP1Q8TAD8 396 aaKnown RBP8.02□□□□□ -1.13
PTPRK-210ENST00000415055 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.13
PTPRK-210ENST00000415055 TIMELESSQ9UNS1 1208 aa8.02□□□□□ -1.13
PTPRK-210ENST00000415055 TOP2BQ02880 1626 aa8.02□□□□□ -1.13
PTPRK-210ENST00000415055 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-210ENST00000415055 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
PTPRK-210ENST00000415055 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
PTPRK-210ENST00000415055 DACH1Q9UI36 760 aa8□□□□□ -1.13
PTPRK-210ENST00000415055 ASXL2Q76L83 1435 aa8□□□□□ -1.13
PTPRK-210ENST00000415055 PTPRGP23470 1445 aa7.99□□□□□ -1.13
PTPRK-210ENST00000415055 GUCA2AQ02747 115 aa7.99□□□□□ -1.13
PTPRK-210ENST00000415055 MRGPRX2Q96LB1 330 aa7.99□□□□□ -1.13
PTPRK-210ENST00000415055 ARXQ96QS3 562 aa7.99□□□□□ -1.13
PTPRK-210ENST00000415055 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
PTPRK-210ENST00000415055 PLB1Q6P1J6 1458 aa7.99□□□□□ -1.13
PTPRK-210ENST00000415055 SMPD1P17405 629 aa7.98□□□□□ -1.13
PTPRK-210ENST00000415055 JUNDP17535 347 aa7.98□□□□□ -1.13
PTPRK-210ENST00000415055 SYMPKQ92797 1274 aaKnown RBP7.97□□□□□ -1.13
PTPRK-210ENST00000415055 GMPR2Q9P2T1 348 aaKnown RBP7.97□□□□□ -1.13
PTPRK-210ENST00000415055 LMTK3Q96Q04 1460 aa7.97□□□□□ -1.13
PTPRK-210ENST00000415055 COL17A1Q9UMD9 1497 aaPredicted RBP7.97□□□□□ -1.13
PTPRK-210ENST00000415055 ABCC2Q92887 1545 aa7.97□□□□□ -1.13
PTPRK-210ENST00000415055 KIAA0586Q9BVV6 1533 aa7.97□□□□□ -1.13
PTPRK-210ENST00000415055 GLI2P10070 1586 aa7.97□□□□□ -1.13
PTPRK-210ENST00000415055 TEX14Q8IWB6 1497 aa7.96□□□□□ -1.13
PTPRK-210ENST00000415055 WNT7BP56706 349 aa7.96□□□□□ -1.14
PTPRK-210ENST00000415055 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
PTPRK-210ENST00000415055 RETREG3Q86VR2 466 aa7.96□□□□□ -1.14
PTPRK-210ENST00000415055 SLC24A3Q9HC58 644 aa7.96□□□□□ -1.14
PTPRK-210ENST00000415055 C11orf95C9JLR9 678 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-210ENST00000415055 J3QL48 77 aa7.95□□□□□ -1.14
PTPRK-210ENST00000415055 SUPT5HO00267 1087 aaKnown RBP7.95□□□□□ -1.14
PTPRK-210ENST00000415055 RC3H1Q5TC82 1133 aaKnown RBP7.95□□□□□ -1.14
PTPRK-210ENST00000415055 MAP3K4Q9Y6R4 1608 aa7.95□□□□□ -1.14
PTPRK-210ENST00000415055 CARMIL2Q6F5E8 1435 aa7.95□□□□□ -1.14
PTPRK-210ENST00000415055 ZMYND10O75800 440 aa7.94□□□□□ -1.14
PTPRK-210ENST00000415055 FDX1P10109 184 aa7.94□□□□□ -1.14
PTPRK-210ENST00000415055 SKOR1P84550 965 aa7.94□□□□□ -1.14
PTPRK-210ENST00000415055 TNIKQ9UKE5 1360 aa7.94□□□□□ -1.14
PTPRK-210ENST00000415055 KIF21BO75037 1637 aa7.93□□□□□ -1.14
PTPRK-210ENST00000415055 SSTR3P32745 418 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-210ENST00000415055 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
PTPRK-210ENST00000415055 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
PTPRK-210ENST00000415055 C6orf229H3BNL8 230 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-210ENST00000415055 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 HPS1Q92902 700 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 ATP13A2Q9NQ11 1180 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 PCDHGC3Q9UN70 934 aa7.92□□□□□ -1.14
PTPRK-210ENST00000415055 ZCCHC11Q5TAX3 1644 aaKnown RBP7.92□□□□□ -1.14
PTPRK-210ENST00000415055 TTLL12Q14166 644 aaPredicted RBP7.91□□□□□ -1.14
PTPRK-210ENST00000415055 UACAQ9BZF9 1416 aa7.9□□□□□ -1.14
PTPRK-210ENST00000415055 MS4A1P11836 297 aa7.9□□□□□ -1.14
PTPRK-210ENST00000415055 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
PTPRK-210ENST00000415055 DISP3Q9P2K9 1392 aa7.89□□□□□ -1.15
PTPRK-210ENST00000415055 CCNYL3P0C7X3 344 aa7.89□□□□□ -1.15
PTPRK-210ENST00000415055 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
PTPRK-210ENST00000415055 AMHR2Q16671 573 aa7.89□□□□□ -1.15
PTPRK-210ENST00000415055 C14orf37Q86TY3 774 aa7.89□□□□□ -1.15
PTPRK-210ENST00000415055 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
PTPRK-210ENST00000415055 IQGAP2Q13576 1575 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 UHRF1BP1LA0JNW5 1464 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 WFS1O76024 890 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 NDUFV2P19404 249 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 EHBP1Q8NDI1 1231 aa7.88□□□□□ -1.15
PTPRK-210ENST00000415055 KIF27Q86VH2 1401 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms