RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
AC004009.1-201ENST00000412413 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
AC004009.1-201ENST00000412413 COL22A1Q8NFW1 1626 aaPredicted RBP12.05□□□□□ -0.48
AC004009.1-201ENST00000412413 TNS3Q68CZ2 1445 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 SF3B2Q13435 895 aaKnown RBP12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
AC004009.1-201ENST00000412413 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
AC004009.1-201ENST00000412413 VPS72Q15906 364 aa12.03□□□□□ -0.48
AC004009.1-201ENST00000412413 DEFB132Q7Z7B7 95 aa12.03□□□□□ -0.48
AC004009.1-201ENST00000412413 FAM83GA6ND36 823 aa12.02□□□□□ -0.49
AC004009.1-201ENST00000412413 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
AC004009.1-201ENST00000412413 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
AC004009.1-201ENST00000412413 SLIT2O94813 1529 aa12.01□□□□□ -0.49
AC004009.1-201ENST00000412413 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
AC004009.1-201ENST00000412413 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
AC004009.1-201ENST00000412413 GPRASP1Q5JY77 1395 aa12.01□□□□□ -0.49
AC004009.1-201ENST00000412413 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
AC004009.1-201ENST00000412413 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
AC004009.1-201ENST00000412413 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
AC004009.1-201ENST00000412413 BTG4Q9NY30 223 aa12□□□□□ -0.49
AC004009.1-201ENST00000412413 NRXN1Q9ULB1 1477 aa12□□□□□ -0.49
AC004009.1-201ENST00000412413 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 IFT172Q9UG01 1749 aa11.99□□□□□ -0.49
AC004009.1-201ENST00000412413 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
AC004009.1-201ENST00000412413 GLI3P10071 1580 aa11.98□□□□□ -0.49
AC004009.1-201ENST00000412413 ANKARQ7Z5J8 1434 aa11.98□□□□□ -0.49
AC004009.1-201ENST00000412413 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
AC004009.1-201ENST00000412413 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
AC004009.1-201ENST00000412413 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
AC004009.1-201ENST00000412413 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
AC004009.1-201ENST00000412413 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
AC004009.1-201ENST00000412413 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
AC004009.1-201ENST00000412413 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
AC004009.1-201ENST00000412413 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
AC004009.1-201ENST00000412413 MIER1Q8N108 512 aa11.95□□□□□ -0.5
AC004009.1-201ENST00000412413 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
AC004009.1-201ENST00000412413 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
AC004009.1-201ENST00000412413 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
AC004009.1-201ENST00000412413 BAG6P46379 1132 aa11.94□□□□□ -0.5
AC004009.1-201ENST00000412413 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
AC004009.1-201ENST00000412413 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
AC004009.1-201ENST00000412413 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
AC004009.1-201ENST00000412413 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
AC004009.1-201ENST00000412413 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
AC004009.1-201ENST00000412413 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
AC004009.1-201ENST00000412413 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
AC004009.1-201ENST00000412413 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
AC004009.1-201ENST00000412413 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
AC004009.1-201ENST00000412413 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 SPATA31A5Q5VU36 1347 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 SPATA31A7Q8IWB4 1347 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 EVA1CP58658 441 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
AC004009.1-201ENST00000412413 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
AC004009.1-201ENST00000412413 EP400Q96L91 3159 aa11.89□□□□□ -0.51
AC004009.1-201ENST00000412413 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
AC004009.1-201ENST00000412413 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
AC004009.1-201ENST00000412413 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
AC004009.1-201ENST00000412413 ACEP12821 1306 aa11.88□□□□□ -0.51
AC004009.1-201ENST00000412413 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
AC004009.1-201ENST00000412413 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
AC004009.1-201ENST00000412413 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
AC004009.1-201ENST00000412413 TRIM37O94972 964 aa11.87□□□□□ -0.51
AC004009.1-201ENST00000412413 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
AC004009.1-201ENST00000412413 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
AC004009.1-201ENST00000412413 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 ATP7BP35670 1465 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
AC004009.1-201ENST00000412413 APBA3O96018 575 aa11.85□□□□□ -0.51
AC004009.1-201ENST00000412413 HRCP23327 699 aa11.85□□□□□ -0.51
AC004009.1-201ENST00000412413 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
AC004009.1-201ENST00000412413 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
AC004009.1-201ENST00000412413 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
AC004009.1-201ENST00000412413 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
AC004009.1-201ENST00000412413 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
AC004009.1-201ENST00000412413 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
AC004009.1-201ENST00000412413 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
AC004009.1-201ENST00000412413 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
AC004009.1-201ENST00000412413 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
AC004009.1-201ENST00000412413 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
AC004009.1-201ENST00000412413 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
AC004009.1-201ENST00000412413 ALS2Q96Q42 1657 aa11.82□□□□□ -0.52
AC004009.1-201ENST00000412413 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
AC004009.1-201ENST00000412413 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
AC004009.1-201ENST00000412413 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms