RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
SNRNP70-202ENST00000401730 YEATS2Q9ULM3 1422 aa21.61■■□□□ 1.05
SNRNP70-202ENST00000401730 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
SNRNP70-202ENST00000401730 TBC1D2Q9BYX2 928 aa21.61■■□□□ 1.05
SNRNP70-202ENST00000401730 TULP4Q9NRJ4 1543 aa21.61■■□□□ 1.05
SNRNP70-202ENST00000401730 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
SNRNP70-202ENST00000401730 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
SNRNP70-202ENST00000401730 ATF7IPQ6VMQ6 1270 aa21.6■■□□□ 1.05
SNRNP70-202ENST00000401730 EMILIN1Q9Y6C2 1016 aa21.6■■□□□ 1.05
SNRNP70-202ENST00000401730 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
SNRNP70-202ENST00000401730 SHPRHQ149N8 1683 aa21.58■■□□□ 1.05
SNRNP70-202ENST00000401730 ABCC3O15438 1527 aa21.58■■□□□ 1.04
SNRNP70-202ENST00000401730 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
SNRNP70-202ENST00000401730 RRS1Q15050 365 aaKnown RBP21.57■■□□□ 1.04
SNRNP70-202ENST00000401730 TSPYL6Q8N831 410 aa21.57■■□□□ 1.04
SNRNP70-202ENST00000401730 IQSEC2Q5JU85 1478 aa21.57■■□□□ 1.04
SNRNP70-202ENST00000401730 GLI2P10070 1586 aa21.56■■□□□ 1.04
SNRNP70-202ENST00000401730 FOXD4L1Q9NU39 408 aa21.56■■□□□ 1.04
SNRNP70-202ENST00000401730 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
SNRNP70-202ENST00000401730 NME9Q86XW9 330 aa21.55■■□□□ 1.04
SNRNP70-202ENST00000401730 FAM83GA6ND36 823 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 TXNDC2Q86VQ3 553 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 NINLQ9Y2I6 1382 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 IFT172Q9UG01 1749 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
SNRNP70-202ENST00000401730 DDX19BQ9UMR2 479 aa21.53■■□□□ 1.04
SNRNP70-202ENST00000401730 POLKQ9UBT6 870 aa21.52■■□□□ 1.04
SNRNP70-202ENST00000401730 PPLO60437 1756 aa21.52■■□□□ 1.04
SNRNP70-202ENST00000401730 ANKRD45Q5TZF3 282 aa21.52■■□□□ 1.04
SNRNP70-202ENST00000401730 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
SNRNP70-202ENST00000401730 ABCC11Q96J66 1382 aa21.52■■□□□ 1.03
SNRNP70-202ENST00000401730 FAM69CQ0P6D2 419 aa21.51■■□□□ 1.03
SNRNP70-202ENST00000401730 LMTK2Q8IWU2 1503 aa21.51■■□□□ 1.03
SNRNP70-202ENST00000401730 APBB1O00213 710 aa21.51■■□□□ 1.03
SNRNP70-202ENST00000401730 SIGLEC1Q9BZZ2 1709 aa21.51■■□□□ 1.03
SNRNP70-202ENST00000401730 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
SNRNP70-202ENST00000401730 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
SNRNP70-202ENST00000401730 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
SNRNP70-202ENST00000401730 YTHDC2Q9H6S0 1430 aaKnown RBP21.48■■□□□ 1.03
SNRNP70-202ENST00000401730 ATAD2Q6PL18 1390 aa21.47■■□□□ 1.03
SNRNP70-202ENST00000401730 MYO3AQ8NEV4 1616 aa21.47■■□□□ 1.03
SNRNP70-202ENST00000401730 ZBTB40Q9NUA8 1239 aa21.47■■□□□ 1.03
SNRNP70-202ENST00000401730 NEXMIFQ5QGS0 1516 aa21.47■■□□□ 1.03
SNRNP70-202ENST00000401730 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
SNRNP70-202ENST00000401730 IPO8O15397 1037 aaKnown RBP21.46■■□□□ 1.03
SNRNP70-202ENST00000401730 NSD2O96028 1365 aa21.45■■□□□ 1.03
SNRNP70-202ENST00000401730 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
SNRNP70-202ENST00000401730 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
SNRNP70-202ENST00000401730 NLRP1Q9C000 1473 aa21.44■■□□□ 1.02
SNRNP70-202ENST00000401730 NEURL4Q96JN8 1562 aa21.43■■□□□ 1.02
SNRNP70-202ENST00000401730 FCHSD2O94868 740 aa21.42■■□□□ 1.02
SNRNP70-202ENST00000401730 C8orf58Q8NAV2 365 aa21.42■■□□□ 1.02
SNRNP70-202ENST00000401730 UBE2Q2Q8WVN8 375 aa21.42■■□□□ 1.02
SNRNP70-202ENST00000401730 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
SNRNP70-202ENST00000401730 ARHGEF28Q8N1W1 1705 aaKnown RBP21.41■■□□□ 1.02
SNRNP70-202ENST00000401730 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
SNRNP70-202ENST00000401730 AEBP1Q8IUX7 1158 aa21.41■■□□□ 1.02
SNRNP70-202ENST00000401730 KIF16BQ96L93 1317 aa21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 VAMP4O75379 141 aa21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 PUS7Q96PZ0 661 aaKnown RBP21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
SNRNP70-202ENST00000401730 AAMPQ13685 434 aa21.39■■□□□ 1.01
SNRNP70-202ENST00000401730 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
SNRNP70-202ENST00000401730 SMC5Q8IY18 1101 aa21.39■■□□□ 1.01
SNRNP70-202ENST00000401730 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
SNRNP70-202ENST00000401730 CD163L1Q9NR16 1453 aa21.39■■□□□ 1.01
SNRNP70-202ENST00000401730 PIK3C2BO00750 1634 aa21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 TWISTNBQ3B726 338 aaPredicted RBP21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 PTPRMP28827 1452 aa21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 MYO5BQ9ULV0 1848 aa21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
SNRNP70-202ENST00000401730 CT47B1P0C2W7 299 aaPredicted RBP21.37■■□□□ 1.01
SNRNP70-202ENST00000401730 PNNQ9H307 717 aaKnown RBP21.37■■□□□ 1.01
SNRNP70-202ENST00000401730 ESF1Q9H501 851 aaKnown RBP21.36■■□□□ 1.01
SNRNP70-202ENST00000401730 NUCB1Q02818 461 aa21.36■■□□□ 1.01
SNRNP70-202ENST00000401730 MCM10Q7L590 875 aa21.36■■□□□ 1.01
SNRNP70-202ENST00000401730 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
SNRNP70-202ENST00000401730 COG3Q96JB2 828 aa21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 DIP2CQ9Y2E4 1556 aa21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 ZBTB7BO15156 539 aaPredicted RBP21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 C16orf71Q8IYS4 520 aaPredicted RBP21.35■■□□□ 1.01
SNRNP70-202ENST00000401730 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
SNRNP70-202ENST00000401730 SIRT2Q8IXJ6 389 aa21.34■■□□□ 1.01
SNRNP70-202ENST00000401730 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
SNRNP70-202ENST00000401730 HSP90AB1P08238 724 aaKnown RBP21.33■■□□□ 1.01
SNRNP70-202ENST00000401730 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
SNRNP70-202ENST00000401730 MCM4P33991 863 aa21.33■■□□□ 1.01
SNRNP70-202ENST00000401730 PANK2Q9BZ23 570 aa21.33■■□□□ 1.01
SNRNP70-202ENST00000401730 IL13P35225 146 aa21.33■■□□□ 1
SNRNP70-202ENST00000401730 IL16Q14005 1332 aa21.32■■□□□ 1
SNRNP70-202ENST00000401730 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
SNRNP70-202ENST00000401730 GNAI1P63096 354 aa21.31■■□□□ 1
SNRNP70-202ENST00000401730 ALDH1L2Q3SY69 923 aa21.3■■□□□ 1
SNRNP70-202ENST00000401730 SMARCA5O60264 1052 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms