RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 MCM4P33991 863 aa13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 RRAGDQ9NQL2 400 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.27
PPP4R1-203ENST00000400556 IFT172Q9UG01 1749 aa13.33□□□□□ -0.28
PPP4R1-203ENST00000400556 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
PPP4R1-203ENST00000400556 TSPYL6Q8N831 410 aa13.33□□□□□ -0.28
PPP4R1-203ENST00000400556 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
PPP4R1-203ENST00000400556 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 HSCBQ8IWL3 235 aa13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
PPP4R1-203ENST00000400556 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
PPP4R1-203ENST00000400556 GLI2P10070 1586 aa13.31□□□□□ -0.28
PPP4R1-203ENST00000400556 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
PPP4R1-203ENST00000400556 ARAP3Q8WWN8 1544 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 TRAK2O60296 914 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 APBB1O00213 710 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 TERF2IPQ9NYB0 399 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 GOLGA6L3A6NEY3 463 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 EMILIN1Q9Y6C2 1016 aa13.3□□□□□ -0.28
PPP4R1-203ENST00000400556 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 SMC5Q8IY18 1101 aa13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 CHMP5Q9NZZ3 219 aa13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 PPLO60437 1756 aa13.29□□□□□ -0.28
PPP4R1-203ENST00000400556 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 AAMPQ13685 434 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
PPP4R1-203ENST00000400556 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.28
PPP4R1-203ENST00000400556 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
PPP4R1-203ENST00000400556 CAMSAP1Q5T5Y3 1602 aa13.27□□□□□ -0.29
PPP4R1-203ENST00000400556 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 SOX12O15370 315 aa13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 MLECQ14165 292 aa13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 NUCB1Q02818 461 aa13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-203ENST00000400556 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 KIF16BQ96L93 1317 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 ABCC3O15438 1527 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 NME9Q86XW9 330 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
PPP4R1-203ENST00000400556 NSD2O96028 1365 aa13.24□□□□□ -0.29
PPP4R1-203ENST00000400556 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
PPP4R1-203ENST00000400556 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
PPP4R1-203ENST00000400556 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 VAMP4O75379 141 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
PPP4R1-203ENST00000400556 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-203ENST00000400556 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
PPP4R1-203ENST00000400556 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-203ENST00000400556 ADGRB2O60241 1585 aa13.22□□□□□ -0.29
PPP4R1-203ENST00000400556 NEXMIFQ5QGS0 1516 aa13.22□□□□□ -0.29
PPP4R1-203ENST00000400556 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-203ENST00000400556 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.29
PPP4R1-203ENST00000400556 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.29
PPP4R1-203ENST00000400556 FCHSD2O94868 740 aa13.21□□□□□ -0.3
PPP4R1-203ENST00000400556 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.3
PPP4R1-203ENST00000400556 NAP1L5Q96NT1 182 aaPredicted RBP13.21□□□□□ -0.3
PPP4R1-203ENST00000400556 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 KIF2CQ99661 725 aa13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 YTHDC2Q9H6S0 1430 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 SSFA2P28290 1259 aa13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
PPP4R1-203ENST00000400556 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 SMARCA5O60264 1052 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 HECW2Q9P2P5 1572 aa13.19□□□□□ -0.3
PPP4R1-203ENST00000400556 IL16Q14005 1332 aa13.18□□□□□ -0.3
PPP4R1-203ENST00000400556 RBM25P49756 843 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-203ENST00000400556 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
PPP4R1-203ENST00000400556 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms