RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 MFAP1P55081 439 aaKnown RBP17.92■□□□□ 0.46
MYD88-201ENST00000396334 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
MYD88-201ENST00000396334 MRE11P49959 708 aa17.91■□□□□ 0.46
MYD88-201ENST00000396334 PODXL2Q9NZ53 605 aa17.9■□□□□ 0.46
MYD88-201ENST00000396334 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
MYD88-201ENST00000396334 RBM25P49756 843 aaKnown RBP17.9■□□□□ 0.46
MYD88-201ENST00000396334 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
MYD88-201ENST00000396334 GRPEL1Q9HAV7 217 aa17.9■□□□□ 0.46
MYD88-201ENST00000396334 IL16Q14005 1332 aa17.9■□□□□ 0.46
MYD88-201ENST00000396334 NPATQ14207 1427 aa17.9■□□□□ 0.46
MYD88-201ENST00000396334 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.46
MYD88-201ENST00000396334 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
MYD88-201ENST00000396334 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 SNX21Q969T3 373 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
MYD88-201ENST00000396334 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
MYD88-201ENST00000396334 ABCC11Q96J66 1382 aa17.88■□□□□ 0.45
MYD88-201ENST00000396334 CFAP74Q9C0B2 1584 aa17.88■□□□□ 0.45
MYD88-201ENST00000396334 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
MYD88-201ENST00000396334 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
MYD88-201ENST00000396334 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
MYD88-201ENST00000396334 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
MYD88-201ENST00000396334 CAMSAP1Q5T5Y3 1602 aa17.86■□□□□ 0.45
MYD88-201ENST00000396334 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
MYD88-201ENST00000396334 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
MYD88-201ENST00000396334 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
MYD88-201ENST00000396334 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
MYD88-201ENST00000396334 NUCB1Q02818 461 aa17.85■□□□□ 0.45
MYD88-201ENST00000396334 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
MYD88-201ENST00000396334 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
MYD88-201ENST00000396334 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
MYD88-201ENST00000396334 MED14O60244 1454 aa17.84■□□□□ 0.45
MYD88-201ENST00000396334 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
MYD88-201ENST00000396334 PDCL3Q9H2J4 239 aa17.84■□□□□ 0.45
MYD88-201ENST00000396334 CIZ1Q9ULV3 898 aaPredicted RBP17.84■□□□□ 0.45
MYD88-201ENST00000396334 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
MYD88-201ENST00000396334 SIGLEC1Q9BZZ2 1709 aa17.83■□□□□ 0.45
MYD88-201ENST00000396334 GAS2L3Q86XJ1 694 aa17.83■□□□□ 0.44
MYD88-201ENST00000396334 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
MYD88-201ENST00000396334 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
MYD88-201ENST00000396334 A0A1W2PP64 1363 aa17.81■□□□□ 0.44
MYD88-201ENST00000396334 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
MYD88-201ENST00000396334 ABCC3O15438 1527 aa17.81■□□□□ 0.44
MYD88-201ENST00000396334 TPM2P07951 284 aa17.81■□□□□ 0.44
MYD88-201ENST00000396334 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
MYD88-201ENST00000396334 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
MYD88-201ENST00000396334 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
MYD88-201ENST00000396334 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
MYD88-201ENST00000396334 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
MYD88-201ENST00000396334 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
MYD88-201ENST00000396334 KIF2CQ99661 725 aa17.8■□□□□ 0.44
MYD88-201ENST00000396334 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
MYD88-201ENST00000396334 PRDM4Q9UKN5 801 aa17.79■□□□□ 0.44
MYD88-201ENST00000396334 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
MYD88-201ENST00000396334 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
MYD88-201ENST00000396334 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
MYD88-201ENST00000396334 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
MYD88-201ENST00000396334 CHD1LQ86WJ1 897 aa17.78■□□□□ 0.44
MYD88-201ENST00000396334 PNPLA6Q8IY17 1366 aa17.78■□□□□ 0.44
MYD88-201ENST00000396334 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
MYD88-201ENST00000396334 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.44
MYD88-201ENST00000396334 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
MYD88-201ENST00000396334 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
MYD88-201ENST00000396334 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
MYD88-201ENST00000396334 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
MYD88-201ENST00000396334 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
MYD88-201ENST00000396334 PTMSP20962 102 aa17.75■□□□□ 0.43
MYD88-201ENST00000396334 SKOR2Q2VWA4 1001 aaPredicted RBP17.75■□□□□ 0.43
MYD88-201ENST00000396334 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
MYD88-201ENST00000396334 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
MYD88-201ENST00000396334 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
MYD88-201ENST00000396334 RIPK4P57078 832 aa17.75■□□□□ 0.43
MYD88-201ENST00000396334 ZFYVE9O95405 1425 aa17.74■□□□□ 0.43
MYD88-201ENST00000396334 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
MYD88-201ENST00000396334 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
MYD88-201ENST00000396334 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
MYD88-201ENST00000396334 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
MYD88-201ENST00000396334 POGZQ7Z3K3 1410 aa17.74■□□□□ 0.43
MYD88-201ENST00000396334 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
MYD88-201ENST00000396334 CLEC17AQ6ZS10 378 aa17.73■□□□□ 0.43
MYD88-201ENST00000396334 PTPRMP28827 1452 aa17.73■□□□□ 0.43
MYD88-201ENST00000396334 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
MYD88-201ENST00000396334 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
MYD88-201ENST00000396334 FYB1O15117 783 aa17.72■□□□□ 0.43
MYD88-201ENST00000396334 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
MYD88-201ENST00000396334 GCC1Q96CN9 775 aa17.72■□□□□ 0.43
MYD88-201ENST00000396334 ZBTB7BO15156 539 aaPredicted RBP17.72■□□□□ 0.43
MYD88-201ENST00000396334 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
MYD88-201ENST00000396334 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
MYD88-201ENST00000396334 ATAD2Q6PL18 1390 aa17.71■□□□□ 0.43
MYD88-201ENST00000396334 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
MYD88-201ENST00000396334 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
MYD88-201ENST00000396334 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
MYD88-201ENST00000396334 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
MYD88-201ENST00000396334 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
MYD88-201ENST00000396334 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms