RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
ARFGAP1-204ENST00000395285 ZMYM3Q14202 1370 aa21.18■□□□□ 0.98
ARFGAP1-204ENST00000395285 CLCN1P35523 988 aa21.18■□□□□ 0.98
ARFGAP1-204ENST00000395285 ALKQ9UM73 1620 aa21.17■□□□□ 0.98
ARFGAP1-204ENST00000395285 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
ARFGAP1-204ENST00000395285 CLUAP1Q96AJ1 413 aa21.17■□□□□ 0.98
ARFGAP1-204ENST00000395285 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
ARFGAP1-204ENST00000395285 PTPRMP28827 1452 aa21.16■□□□□ 0.98
ARFGAP1-204ENST00000395285 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
ARFGAP1-204ENST00000395285 CGNL1Q0VF96 1302 aa21.15■□□□□ 0.98
ARFGAP1-204ENST00000395285 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
ARFGAP1-204ENST00000395285 ANKRD36BQ8N2N9 1353 aa21.14■□□□□ 0.97
ARFGAP1-204ENST00000395285 RLBP1P12271 317 aa21.14■□□□□ 0.97
ARFGAP1-204ENST00000395285 RARSP54136 660 aaKnown RBP21.14■□□□□ 0.97
ARFGAP1-204ENST00000395285 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.97
ARFGAP1-204ENST00000395285 SEC24BO95487 1268 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 CABP2Q9NPB3 220 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 USP32Q8NFA0 1604 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 PDCL3Q9H2J4 239 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 POGKQ9P215 609 aa21.13■□□□□ 0.97
ARFGAP1-204ENST00000395285 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
ARFGAP1-204ENST00000395285 L1TD1Q5T7N2 865 aaKnown RBP21.12■□□□□ 0.97
ARFGAP1-204ENST00000395285 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
ARFGAP1-204ENST00000395285 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
ARFGAP1-204ENST00000395285 SHPRHQ149N8 1683 aa21.11■□□□□ 0.97
ARFGAP1-204ENST00000395285 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.97
ARFGAP1-204ENST00000395285 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
ARFGAP1-204ENST00000395285 PCDHB15Q9Y5E8 787 aa21.1■□□□□ 0.97
ARFGAP1-204ENST00000395285 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
ARFGAP1-204ENST00000395285 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
ARFGAP1-204ENST00000395285 NSD2O96028 1365 aa21.08■□□□□ 0.97
ARFGAP1-204ENST00000395285 MINK1Q8N4C8 1332 aaPredicted RBP21.08■□□□□ 0.97
ARFGAP1-204ENST00000395285 TNRQ92752 1358 aa21.07■□□□□ 0.96
ARFGAP1-204ENST00000395285 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
ARFGAP1-204ENST00000395285 ARXQ96QS3 562 aa21.07■□□□□ 0.96
ARFGAP1-204ENST00000395285 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
ARFGAP1-204ENST00000395285 USP19O94966 1318 aa21.06■□□□□ 0.96
ARFGAP1-204ENST00000395285 TSR2Q969E8 191 aaKnown RBP21.05■□□□□ 0.96
ARFGAP1-204ENST00000395285 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 WDR63Q8IWG1 891 aa21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 ABCC11Q96J66 1382 aa21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 IQSEC2Q5JU85 1478 aa21.04■□□□□ 0.96
ARFGAP1-204ENST00000395285 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
ARFGAP1-204ENST00000395285 A0A1W2PP64 1363 aa21.03■□□□□ 0.96
ARFGAP1-204ENST00000395285 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
ARFGAP1-204ENST00000395285 MAPK8IP3Q9UPT6 1336 aa21.02■□□□□ 0.96
ARFGAP1-204ENST00000395285 CDK19Q9BWU1 502 aa21.01■□□□□ 0.95
ARFGAP1-204ENST00000395285 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
ARFGAP1-204ENST00000395285 PDZRN3Q9UPQ7 1066 aa21.01■□□□□ 0.95
ARFGAP1-204ENST00000395285 PMFBP1Q8TBY8 1022 aa21■□□□□ 0.95
ARFGAP1-204ENST00000395285 MYH16Q9H6N6 1097 aa21■□□□□ 0.95
ARFGAP1-204ENST00000395285 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
ARFGAP1-204ENST00000395285 BBXQ8WY36 941 aaPredicted RBP20.98■□□□□ 0.95
ARFGAP1-204ENST00000395285 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
ARFGAP1-204ENST00000395285 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
ARFGAP1-204ENST00000395285 SLKQ9H2G2 1235 aaPredicted RBP20.98■□□□□ 0.95
ARFGAP1-204ENST00000395285 FTSJ3Q8IY81 847 aaKnown RBP20.97■□□□□ 0.95
ARFGAP1-204ENST00000395285 XRCC6P12956 609 aaKnown RBP eCLIP20.97■□□□□ 0.955e-6■■□□□ 11.5
ARFGAP1-204ENST00000395285 CCDC27Q2M243 656 aa20.97■□□□□ 0.95
ARFGAP1-204ENST00000395285 METP08581 1390 aa20.97■□□□□ 0.95
ARFGAP1-204ENST00000395285 CD163L1Q9NR16 1453 aa20.97■□□□□ 0.95
ARFGAP1-204ENST00000395285 HDGFL2Q7Z4V5 671 aaPredicted RBP20.96■□□□□ 0.95
ARFGAP1-204ENST00000395285 TPM2P07951 284 aa20.96■□□□□ 0.95
ARFGAP1-204ENST00000395285 EXOSC9Q06265 439 aaKnown RBP20.96■□□□□ 0.95
ARFGAP1-204ENST00000395285 SMC4Q9NTJ3 1288 aa20.95■□□□□ 0.94
ARFGAP1-204ENST00000395285 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 NLRP1Q9C000 1473 aa20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
ARFGAP1-204ENST00000395285 MED14O60244 1454 aa20.93■□□□□ 0.94
ARFGAP1-204ENST00000395285 ZKSCAN2Q63HK3 967 aa20.93■□□□□ 0.94
ARFGAP1-204ENST00000395285 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
ARFGAP1-204ENST00000395285 PANK2Q9BZ23 570 aa20.92■□□□□ 0.94
ARFGAP1-204ENST00000395285 FYB1O15117 783 aa20.92■□□□□ 0.94
ARFGAP1-204ENST00000395285 TMPOP42166 694 aaKnown RBP20.92■□□□□ 0.94
ARFGAP1-204ENST00000395285 TECPR2O15040 1411 aa20.92■□□□□ 0.94
ARFGAP1-204ENST00000395285 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
ARFGAP1-204ENST00000395285 VIRMAQ69YN4 1812 aaKnown RBP20.91■□□□□ 0.94
ARFGAP1-204ENST00000395285 FBLN1P23142 703 aa20.91■□□□□ 0.94
ARFGAP1-204ENST00000395285 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
ARFGAP1-204ENST00000395285 PLEKHF1Q96S99 279 aa20.91■□□□□ 0.94
ARFGAP1-204ENST00000395285 ITPRIPQ8IWB1 547 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 SPRYD3Q8NCJ5 442 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 SSH1Q8WYL5 1049 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 GOLGA6L3A6NEY3 463 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 TRIM27P14373 513 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 TXNDC2Q86VQ3 553 aa20.9■□□□□ 0.94
ARFGAP1-204ENST00000395285 ATP7BP35670 1465 aa20.89■□□□□ 0.94
ARFGAP1-204ENST00000395285 WASLO00401 505 aaPredicted RBP20.89■□□□□ 0.93
ARFGAP1-204ENST00000395285 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
ARFGAP1-204ENST00000395285 BECN1Q14457 450 aa20.89■□□□□ 0.93
ARFGAP1-204ENST00000395285 TAF7LQ5H9L4 462 aa20.89■□□□□ 0.93
ARFGAP1-204ENST00000395285 UPF2Q9HAU5 1272 aaKnown RBP20.89■□□□□ 0.93
ARFGAP1-204ENST00000395285 RIPK4P57078 832 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms