RNA–Protein interactions for RNA: ENST00000393543.7

MDM1-203, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-203ENST00000393543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.28
MDM1-203ENST00000393543 ERBB4Q15303 1308 aa16.82■□□□□ 0.28
MDM1-203ENST00000393543 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
MDM1-203ENST00000393543 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
MDM1-203ENST00000393543 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
MDM1-203ENST00000393543 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
MDM1-203ENST00000393543 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
MDM1-203ENST00000393543 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
MDM1-203ENST00000393543 PTPRTO14522 1441 aa16.81■□□□□ 0.28
MDM1-203ENST00000393543 KANK1Q14678 1352 aa16.81■□□□□ 0.28
MDM1-203ENST00000393543 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
MDM1-203ENST00000393543 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
MDM1-203ENST00000393543 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
MDM1-203ENST00000393543 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
MDM1-203ENST00000393543 MYO3AQ8NEV4 1616 aa16.8■□□□□ 0.28
MDM1-203ENST00000393543 TICAM2Q86XR7 235 aa16.79■□□□□ 0.28
MDM1-203ENST00000393543 GTPBP4Q9BZE4 634 aaKnown RBP16.79■□□□□ 0.28
MDM1-203ENST00000393543 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
MDM1-203ENST00000393543 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
MDM1-203ENST00000393543 SOX12O15370 315 aa16.78■□□□□ 0.28
MDM1-203ENST00000393543 TRAK2O60296 914 aa16.78■□□□□ 0.28
MDM1-203ENST00000393543 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.28
MDM1-203ENST00000393543 PANK2Q9BZ23 570 aa16.77■□□□□ 0.28
MDM1-203ENST00000393543 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
MDM1-203ENST00000393543 NCOA3Q9Y6Q9 1424 aa16.77■□□□□ 0.27
MDM1-203ENST00000393543 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 DEPDC5O75140 1603 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 APPP05067 770 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
MDM1-203ENST00000393543 TET3O43151 1660 aa16.75■□□□□ 0.27
MDM1-203ENST00000393543 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
MDM1-203ENST00000393543 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
MDM1-203ENST00000393543 SBNO2Q9Y2G9 1366 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 RLBP1P12271 317 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 ZNF622Q969S3 477 aaKnown RBP eCLIP16.74■□□□□ 0.27
MDM1-203ENST00000393543 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 MYOM2P54296 1465 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 TERF1P54274 439 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
MDM1-203ENST00000393543 ARID3AQ99856 593 aa16.74■□□□□ 0.27
MDM1-203ENST00000393543 PTMAP06454 111 aaKnown RBP16.73■□□□□ 0.27
MDM1-203ENST00000393543 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
MDM1-203ENST00000393543 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
MDM1-203ENST00000393543 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
MDM1-203ENST00000393543 DDIT3P35638 169 aa16.72■□□□□ 0.27
MDM1-203ENST00000393543 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
MDM1-203ENST00000393543 IFT172Q9UG01 1749 aa16.72■□□□□ 0.27
MDM1-203ENST00000393543 SLC20A2Q08357 652 aa16.71■□□□□ 0.27
MDM1-203ENST00000393543 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
MDM1-203ENST00000393543 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
MDM1-203ENST00000393543 ABCC1P33527 1531 aa16.7■□□□□ 0.26
MDM1-203ENST00000393543 CT47B1P0C2W7 299 aaPredicted RBP16.7■□□□□ 0.26
MDM1-203ENST00000393543 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
MDM1-203ENST00000393543 CHMP4CQ96CF2 233 aa16.7■□□□□ 0.26
MDM1-203ENST00000393543 IGSF3O75054 1194 aa16.69■□□□□ 0.26
MDM1-203ENST00000393543 PTMSP20962 102 aa16.69■□□□□ 0.26
MDM1-203ENST00000393543 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
MDM1-203ENST00000393543 SNX21Q969T3 373 aa16.69■□□□□ 0.26
MDM1-203ENST00000393543 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
MDM1-203ENST00000393543 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
MDM1-203ENST00000393543 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
MDM1-203ENST00000393543 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
MDM1-203ENST00000393543 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
MDM1-203ENST00000393543 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
MDM1-203ENST00000393543 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
MDM1-203ENST00000393543 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
MDM1-203ENST00000393543 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
MDM1-203ENST00000393543 TNNQ9UQP3 1299 aa16.68■□□□□ 0.26
MDM1-203ENST00000393543 PLCH2O75038 1416 aa16.67■□□□□ 0.26
MDM1-203ENST00000393543 KIF1BO60333 1816 aa16.67■□□□□ 0.26
MDM1-203ENST00000393543 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
MDM1-203ENST00000393543 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
MDM1-203ENST00000393543 RBM25P49756 843 aaKnown RBP16.66■□□□□ 0.26
MDM1-203ENST00000393543 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
MDM1-203ENST00000393543 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
MDM1-203ENST00000393543 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
MDM1-203ENST00000393543 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
MDM1-203ENST00000393543 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
MDM1-203ENST00000393543 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
MDM1-203ENST00000393543 OFD1O75665 1012 aa16.65■□□□□ 0.26
MDM1-203ENST00000393543 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
MDM1-203ENST00000393543 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
MDM1-203ENST00000393543 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
MDM1-203ENST00000393543 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
MDM1-203ENST00000393543 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
MDM1-203ENST00000393543 ZNF592Q92610 1267 aa16.64■□□□□ 0.25
MDM1-203ENST00000393543 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
MDM1-203ENST00000393543 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
MDM1-203ENST00000393543 LMTK3Q96Q04 1460 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 GBP4Q96PP9 640 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
MDM1-203ENST00000393543 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
MDM1-203ENST00000393543 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
MDM1-203ENST00000393543 ARAP3Q8WWN8 1544 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms