RNA–Protein interactions for RNA: ENST00000393543.7

MDM1-203, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-203ENST00000393543 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
MDM1-203ENST00000393543 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
MDM1-203ENST00000393543 MYT1Q01538 1121 aa23.26■■□□□ 1.31
MDM1-203ENST00000393543 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.18
MDM1-203ENST00000393543 ABCC9O60706 1549 aa22.34■■□□□ 1.17
MDM1-203ENST00000393543 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
MDM1-203ENST00000393543 HRCP23327 699 aa22.25■■□□□ 1.15
MDM1-203ENST00000393543 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
MDM1-203ENST00000393543 PRKCSHP14314 528 aaPredicted RBP22.14■■□□□ 1.13
MDM1-203ENST00000393543 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
MDM1-203ENST00000393543 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
MDM1-203ENST00000393543 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
MDM1-203ENST00000393543 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
MDM1-203ENST00000393543 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
MDM1-203ENST00000393543 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
MDM1-203ENST00000393543 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
MDM1-203ENST00000393543 BCL11AQ9H165 835 aa21.57■■□□□ 1.04
MDM1-203ENST00000393543 APLP2Q06481 763 aa21.55■■□□□ 1.04
MDM1-203ENST00000393543 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
MDM1-203ENST00000393543 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
MDM1-203ENST00000393543 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
MDM1-203ENST00000393543 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
MDM1-203ENST00000393543 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
MDM1-203ENST00000393543 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
MDM1-203ENST00000393543 SLC24A1O60721 1099 aa21.29■■□□□ 1
MDM1-203ENST00000393543 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
MDM1-203ENST00000393543 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
MDM1-203ENST00000393543 NACADO15069 1562 aa21.05■□□□□ 0.96
MDM1-203ENST00000393543 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
MDM1-203ENST00000393543 CENPBP07199 599 aaPredicted RBP20.81■□□□□ 0.92
MDM1-203ENST00000393543 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
MDM1-203ENST00000393543 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
MDM1-203ENST00000393543 ACIN1Q9UKV3 1341 aaKnown RBP20.67■□□□□ 0.9
MDM1-203ENST00000393543 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
MDM1-203ENST00000393543 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
MDM1-203ENST00000393543 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
MDM1-203ENST00000393543 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
MDM1-203ENST00000393543 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
MDM1-203ENST00000393543 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
MDM1-203ENST00000393543 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
MDM1-203ENST00000393543 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
MDM1-203ENST00000393543 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
MDM1-203ENST00000393543 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
MDM1-203ENST00000393543 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
MDM1-203ENST00000393543 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
MDM1-203ENST00000393543 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
MDM1-203ENST00000393543 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
MDM1-203ENST00000393543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
MDM1-203ENST00000393543 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
MDM1-203ENST00000393543 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
MDM1-203ENST00000393543 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
MDM1-203ENST00000393543 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.82
MDM1-203ENST00000393543 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
MDM1-203ENST00000393543 WIZO95785 1651 aa20.09■□□□□ 0.81
MDM1-203ENST00000393543 ANO8Q9HCE9 1232 aaPredicted RBP20.07■□□□□ 0.8
MDM1-203ENST00000393543 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
MDM1-203ENST00000393543 UBE2Q2Q8WVN8 375 aa19.99■□□□□ 0.79
MDM1-203ENST00000393543 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
MDM1-203ENST00000393543 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
MDM1-203ENST00000393543 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
MDM1-203ENST00000393543 CUX2O14529 1486 aa19.91■□□□□ 0.78
MDM1-203ENST00000393543 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
MDM1-203ENST00000393543 EEA1Q15075 1411 aa19.86■□□□□ 0.77
MDM1-203ENST00000393543 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
MDM1-203ENST00000393543 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
MDM1-203ENST00000393543 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
MDM1-203ENST00000393543 SMARCA2P51531 1590 aa19.73■□□□□ 0.75
MDM1-203ENST00000393543 SOGA1O94964 1423 aa19.69■□□□□ 0.74
MDM1-203ENST00000393543 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
MDM1-203ENST00000393543 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
MDM1-203ENST00000393543 MIER1Q8N108 512 aa19.66■□□□□ 0.74
MDM1-203ENST00000393543 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
MDM1-203ENST00000393543 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
MDM1-203ENST00000393543 TSHZ2Q9NRE2 1034 aa19.59■□□□□ 0.73
MDM1-203ENST00000393543 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
MDM1-203ENST00000393543 PODXL2Q9NZ53 605 aa19.58■□□□□ 0.73
MDM1-203ENST00000393543 KIF21BO75037 1637 aa19.57■□□□□ 0.72
MDM1-203ENST00000393543 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
MDM1-203ENST00000393543 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
MDM1-203ENST00000393543 PKNOX2Q96KN3 472 aa19.52■□□□□ 0.71
MDM1-203ENST00000393543 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
MDM1-203ENST00000393543 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
MDM1-203ENST00000393543 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
MDM1-203ENST00000393543 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
MDM1-203ENST00000393543 CLIP1P30622 1438 aa19.42■□□□□ 0.7
MDM1-203ENST00000393543 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
MDM1-203ENST00000393543 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
MDM1-203ENST00000393543 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
MDM1-203ENST00000393543 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
MDM1-203ENST00000393543 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
MDM1-203ENST00000393543 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
MDM1-203ENST00000393543 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
MDM1-203ENST00000393543 ERICH6BQ5W0A0 696 aa19.25■□□□□ 0.67
MDM1-203ENST00000393543 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
MDM1-203ENST00000393543 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
MDM1-203ENST00000393543 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
MDM1-203ENST00000393543 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
MDM1-203ENST00000393543 RRBP1Q9P2E9 1410 aaKnown RBP19.13■□□□□ 0.65
MDM1-203ENST00000393543 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
MDM1-203ENST00000393543 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms