RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.59
CCDC50-202ENST00000392456 FGD1P98174 961 aa24.95■■□□□ 1.58
CCDC50-202ENST00000392456 USP32Q8NFA0 1604 aa24.94■■□□□ 1.58
CCDC50-202ENST00000392456 ADGRB2O60241 1585 aa24.94■■□□□ 1.58
CCDC50-202ENST00000392456 ZBTB47Q9UFB7 747 aaPredicted RBP24.94■■□□□ 1.58
CCDC50-202ENST00000392456 CPSF1Q10570 1443 aaKnown RBP24.94■■□□□ 1.58
CCDC50-202ENST00000392456 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
CCDC50-202ENST00000392456 PPP4R2Q9NY27 417 aa24.92■■□□□ 1.58
CCDC50-202ENST00000392456 PDE4CQ08493 712 aa24.91■■□□□ 1.58
CCDC50-202ENST00000392456 ADAMTS8Q9UP79 889 aa24.91■■□□□ 1.58
CCDC50-202ENST00000392456 AAMPQ13685 434 aa24.91■■□□□ 1.58
CCDC50-202ENST00000392456 A0A0U1RQG5 324 aaPredicted RBP24.89■■□□□ 1.58
CCDC50-202ENST00000392456 ZRANB1Q9UGI0 708 aa24.89■■□□□ 1.57
CCDC50-202ENST00000392456 FBLN1P23142 703 aa24.88■■□□□ 1.57
CCDC50-202ENST00000392456 ANP32AP39687 249 aaKnown RBP24.88■■□□□ 1.57
CCDC50-202ENST00000392456 IRX6P78412 446 aaPredicted RBP24.88■■□□□ 1.57
CCDC50-202ENST00000392456 ZBED9Q6R2W3 1325 aa24.88■■□□□ 1.57
CCDC50-202ENST00000392456 NSD2O96028 1365 aa24.88■■□□□ 1.57
CCDC50-202ENST00000392456 MTHFSP49914 203 aa24.88■■□□□ 1.57
CCDC50-202ENST00000392456 RBM10P98175 930 aaKnown RBP24.88■■□□□ 1.57
CCDC50-202ENST00000392456 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
CCDC50-202ENST00000392456 ACEP12821 1306 aa24.87■■□□□ 1.57
CCDC50-202ENST00000392456 NME9Q86XW9 330 aa24.86■■□□□ 1.57
CCDC50-202ENST00000392456 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
CCDC50-202ENST00000392456 CDC42BPGQ6DT37 1551 aa24.85■■□□□ 1.57
CCDC50-202ENST00000392456 PLEKHG3A1L390 1219 aa24.85■■□□□ 1.57
CCDC50-202ENST00000392456 NEFMP07197 916 aa24.85■■□□□ 1.57
CCDC50-202ENST00000392456 FAM43AQ8N2R8 423 aa24.84■■□□□ 1.57
CCDC50-202ENST00000392456 LMTK3Q96Q04 1460 aa24.83■■□□□ 1.56
CCDC50-202ENST00000392456 RGPD8O14715 1765 aaPredicted RBP24.82■■□□□ 1.56
CCDC50-202ENST00000392456 EDC4Q6P2E9 1401 aaKnown RBP24.82■■□□□ 1.56
CCDC50-202ENST00000392456 WDR43Q15061 677 aaKnown RBP eCLIP24.81■■□□□ 1.56
CCDC50-202ENST00000392456 TOPAZ1Q8N9V7 1692 aa24.81■■□□□ 1.56
CCDC50-202ENST00000392456 POLR3AO14802 1390 aaPredicted RBP24.81■■□□□ 1.56
CCDC50-202ENST00000392456 ZNF692Q9BU19 519 aaPredicted RBP24.8■■□□□ 1.56
CCDC50-202ENST00000392456 NALCNQ8IZF0 1738 aa24.8■■□□□ 1.56
CCDC50-202ENST00000392456 BLMP54132 1417 aaPredicted RBP24.77■■□□□ 1.56
CCDC50-202ENST00000392456 PROSER2Q86WR7 435 aaPredicted RBP24.77■■□□□ 1.56
CCDC50-202ENST00000392456 AKAP12Q02952 1782 aa24.77■■□□□ 1.56
CCDC50-202ENST00000392456 C14orf37Q86TY3 774 aa24.77■■□□□ 1.56
CCDC50-202ENST00000392456 MON2Q7Z3U7 1717 aa24.76■■□□□ 1.56
CCDC50-202ENST00000392456 CCDC146Q8IYE0 955 aa24.76■■□□□ 1.55
CCDC50-202ENST00000392456 TTC21BQ7Z4L5 1316 aa24.76■■□□□ 1.55
CCDC50-202ENST00000392456 KIF20BQ96Q89 1820 aa24.75■■□□□ 1.55
CCDC50-202ENST00000392456 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
CCDC50-202ENST00000392456 USP6P35125 1406 aa24.75■■□□□ 1.55
CCDC50-202ENST00000392456 ADGRL3Q9HAR2 1447 aa24.74■■□□□ 1.55
CCDC50-202ENST00000392456 ITSN1Q15811 1721 aa24.74■■□□□ 1.55
CCDC50-202ENST00000392456 PDIA4P13667 645 aaKnown RBP24.74■■□□□ 1.55
CCDC50-202ENST00000392456 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
CCDC50-202ENST00000392456 NWD1Q149M9 1564 aa24.73■■□□□ 1.55
CCDC50-202ENST00000392456 FMN2Q9NZ56 1722 aa24.73■■□□□ 1.55
CCDC50-202ENST00000392456 GSE1Q14687 1217 aa24.72■■□□□ 1.55
CCDC50-202ENST00000392456 POLKQ9UBT6 870 aa24.72■■□□□ 1.55
CCDC50-202ENST00000392456 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
CCDC50-202ENST00000392456 SSH2Q76I76 1423 aa24.71■■□□□ 1.55
CCDC50-202ENST00000392456 INSRP06213 1382 aa24.71■■□□□ 1.55
CCDC50-202ENST00000392456 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
CCDC50-202ENST00000392456 PPM1GO15355 546 aaPredicted RBP24.7■■□□□ 1.54
CCDC50-202ENST00000392456 COG3Q96JB2 828 aa24.7■■□□□ 1.54
CCDC50-202ENST00000392456 SHPRHQ149N8 1683 aa24.69■■□□□ 1.54
CCDC50-202ENST00000392456 EMILIN1Q9Y6C2 1016 aa24.69■■□□□ 1.54
CCDC50-202ENST00000392456 STRCQ7RTU9 1775 aa24.69■■□□□ 1.54
CCDC50-202ENST00000392456 RRP9O43818 475 aaKnown RBP24.69■■□□□ 1.54
CCDC50-202ENST00000392456 CFAP53Q96M91 514 aa24.68■■□□□ 1.54
CCDC50-202ENST00000392456 NRKQ7Z2Y5 1582 aa24.68■■□□□ 1.54
CCDC50-202ENST00000392456 RRS1Q15050 365 aaKnown RBP24.67■■□□□ 1.54
CCDC50-202ENST00000392456 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
CCDC50-202ENST00000392456 B4GALNT3Q6L9W6 998 aa24.67■■□□□ 1.54
CCDC50-202ENST00000392456 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
CCDC50-202ENST00000392456 PHF8Q9UPP1 1060 aa24.67■■□□□ 1.54
CCDC50-202ENST00000392456 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
CCDC50-202ENST00000392456 APAF1O14727 1248 aa24.66■■□□□ 1.54
CCDC50-202ENST00000392456 HSP90AA2PQ14568 343 aaPredicted RBP24.66■■□□□ 1.54
CCDC50-202ENST00000392456 CDCA7LQ96GN5 454 aa24.66■■□□□ 1.54
CCDC50-202ENST00000392456 COL3A1P02461 1466 aaPredicted RBP24.64■■□□□ 1.53
CCDC50-202ENST00000392456 SOX12O15370 315 aa24.63■■□□□ 1.53
CCDC50-202ENST00000392456 C19orf44Q9H6X5 657 aa24.63■■□□□ 1.53
CCDC50-202ENST00000392456 PNPLA6Q8IY17 1366 aa24.63■■□□□ 1.53
CCDC50-202ENST00000392456 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
CCDC50-202ENST00000392456 U2AF1L5P0DN76 240 aaPredicted RBP24.62■■□□□ 1.53
CCDC50-202ENST00000392456 U2AF1Q01081 240 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCDC50-202ENST00000392456 NUTM2GQ5VZR2 741 aa24.62■■□□□ 1.53
CCDC50-202ENST00000392456 MAP2P11137 1827 aaKnown RBP24.62■■□□□ 1.53
CCDC50-202ENST00000392456 OVOS2A0A0J9YW53 1432 aa24.61■■□□□ 1.53
CCDC50-202ENST00000392456 OVOS2Q6IE36 1432 aa24.61■■□□□ 1.53
CCDC50-202ENST00000392456 U2SURPO15042 1029 aaKnown RBP24.61■■□□□ 1.53
CCDC50-202ENST00000392456 BCL11BQ9C0K0 894 aaPredicted RBP24.6■■□□□ 1.53
CCDC50-202ENST00000392456 ZNF335Q9H4Z2 1342 aaPredicted RBP24.6■■□□□ 1.53
CCDC50-202ENST00000392456 NUDCQ9Y266 331 aa24.59■■□□□ 1.53
CCDC50-202ENST00000392456 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
CCDC50-202ENST00000392456 AATKQ6ZMQ8 1374 aa24.59■■□□□ 1.53
CCDC50-202ENST00000392456 SMG6Q86US8 1419 aaKnown RBP24.59■■□□□ 1.53
CCDC50-202ENST00000392456 FOXO3O43524 673 aa24.58■■□□□ 1.53
CCDC50-202ENST00000392456 XPCQ01831 940 aaPredicted RBP24.58■■□□□ 1.53
CCDC50-202ENST00000392456 DIAPH1O60610 1272 aaKnown RBP24.58■■□□□ 1.53
CCDC50-202ENST00000392456 NLRP6P59044 892 aa24.56■■□□□ 1.52
CCDC50-202ENST00000392456 RRP7AQ9Y3A4 280 aaKnown RBP24.56■■□□□ 1.52
CCDC50-202ENST00000392456 PSME1Q06323 249 aa24.55■■□□□ 1.52
CCDC50-202ENST00000392456 ZNF521Q96K83 1311 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms