RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 POLKQ9UBT6 870 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 PLEKHF1Q96S99 279 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 CCDC61Q9Y6R9 512 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 PRR36Q9H6K5 1346 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 BCL2L13Q9BXK5 485 aa27.62■■■□□ 2.01
SPTBN4-203ENST00000392023 EMILIN1Q9Y6C2 1016 aa27.62■■■□□ 2.01
SPTBN4-203ENST00000392023 FRAT1Q92837 279 aaPredicted RBP27.61■■■□□ 2.01
SPTBN4-203ENST00000392023 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
SPTBN4-203ENST00000392023 COL3A1P02461 1466 aaPredicted RBP27.6■■■□□ 2.01
SPTBN4-203ENST00000392023 ANKRD26Q9UPS8 1709 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 WDR63Q8IWG1 891 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 ATP7BP35670 1465 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 KIF20BQ96Q89 1820 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 MED14O60244 1454 aa27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 TMPOP42166 694 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 TSR2Q969E8 191 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 MAPK8IP3Q9UPT6 1336 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 RRS1Q15050 365 aaKnown RBP27.57■■■□□ 2
SPTBN4-203ENST00000392023 C3P01024 1663 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 CANXP27824 592 aaKnown RBP27.57■■■□□ 2
SPTBN4-203ENST00000392023 HMOX1P09601 288 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 TECPR2O15040 1411 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 CCDC27Q2M243 656 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 PANK1Q8TE04 598 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 SIRT1Q96EB6 747 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 AMOTL2Q9Y2J4 779 aa27.55■■■□□ 2
SPTBN4-203ENST00000392023 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
SPTBN4-203ENST00000392023 PTPRUQ92729 1446 aa27.54■■■□□ 2
SPTBN4-203ENST00000392023 TNNQ9UQP3 1299 aa27.54■■■□□ 2
SPTBN4-203ENST00000392023 MAP2P11137 1827 aaKnown RBP27.54■■■□□ 2
SPTBN4-203ENST00000392023 RARSP54136 660 aaKnown RBP27.53■■■□□ 2
SPTBN4-203ENST00000392023 RIPK4P57078 832 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 PNPLA6Q8IY17 1366 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 CPS1P31327 1500 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 EDC4Q6P2E9 1401 aaKnown RBP27.52■■■□□ 2
SPTBN4-203ENST00000392023 COG3Q96JB2 828 aa27.51■■■□□ 2
SPTBN4-203ENST00000392023 COG6Q9Y2V7 657 aa27.51■■■□□ 2
SPTBN4-203ENST00000392023 PRKAR2BP31323 418 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 KNDC1Q76NI1 1749 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 ACEP12821 1306 aa27.49■■□□□ 1.99
SPTBN4-203ENST00000392023 SOX12O15370 315 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 THEMISQ8N1K5 641 aaPredicted RBP27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 MYH16Q9H6N6 1097 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 PHACTR3Q96KR7 559 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 CLUAP1Q96AJ1 413 aa27.47■■□□□ 1.99
SPTBN4-203ENST00000392023 ADGRB2O60241 1585 aa27.47■■□□□ 1.99
SPTBN4-203ENST00000392023 KDM2BQ8NHM5 1336 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 UBE2Q2Q8WVN8 375 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 EXOSC9Q06265 439 aaKnown RBP27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 RSPH6AQ9H0K4 717 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 TCERG1O14776 1098 aaKnown RBP27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 CDC42BPGQ6DT37 1551 aa27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 FCHSD2O94868 740 aa27.44■■□□□ 1.98
SPTBN4-203ENST00000392023 RLBP1P12271 317 aa27.43■■□□□ 1.98
SPTBN4-203ENST00000392023 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 IL13P35225 146 aa27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 THUMPD2Q9BTF0 503 aaKnown RBP27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 TBX22Q9Y458 520 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 PDE4AP27815 886 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 PDE3AQ14432 1141 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 TTC21BQ7Z4L5 1316 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 CENPQQ7L2Z9 268 aaPredicted RBP27.4■■□□□ 1.98
SPTBN4-203ENST00000392023 RBM33Q96EV2 1170 aaKnown RBP27.4■■□□□ 1.98
SPTBN4-203ENST00000392023 IGHDP01880 384 aa27.39■■□□□ 1.98
SPTBN4-203ENST00000392023 LRRC7Q96NW7 1537 aa27.39■■□□□ 1.98
SPTBN4-203ENST00000392023 NPM2Q86SE8 214 aaKnown RBP27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 SLIT1O75093 1534 aa27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 MON2Q7Z3U7 1717 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 NEFMP07197 916 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 KCNA6P17658 529 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 NCBP3Q53F19 620 aaKnown RBP27.36■■□□□ 1.97
SPTBN4-203ENST00000392023 RGS3P49796 1198 aa27.36■■□□□ 1.97
SPTBN4-203ENST00000392023 AKAP12Q02952 1782 aa27.35■■□□□ 1.97
SPTBN4-203ENST00000392023 PLEKHG3A1L390 1219 aa27.35■■□□□ 1.97
SPTBN4-203ENST00000392023 SMC4Q9NTJ3 1288 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 BACH2Q9BYV9 841 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 AATKQ6ZMQ8 1374 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 NGDNQ8NEJ9 315 aaKnown RBP27.32■■□□□ 1.96
SPTBN4-203ENST00000392023 SSH1Q8WYL5 1049 aa27.32■■□□□ 1.96
SPTBN4-203ENST00000392023 AEBP1Q8IUX7 1158 aa27.31■■□□□ 1.96
SPTBN4-203ENST00000392023 NFE2L2Q16236 605 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 NOP58Q9Y2X3 529 aaKnown RBP27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 USP6P35125 1406 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 FAM83GA6ND36 823 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 MS4A1P11836 297 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 HSP90AB2PQ58FF8 381 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 RGPD8O14715 1765 aaPredicted RBP27.29■■□□□ 1.96
SPTBN4-203ENST00000392023 CDK12Q9NYV4 1490 aaPredicted RBP27.28■■□□□ 1.96
SPTBN4-203ENST00000392023 DCTN1Q14203 1278 aa27.28■■□□□ 1.96
SPTBN4-203ENST00000392023 EIF4A2Q14240 407 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms