RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 POLKQ9UBT6 870 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 PLEKHF1Q96S99 279 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 CCDC61Q9Y6R9 512 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 PRR36Q9H6K5 1346 aa27.63■■■□□ 2.01
SPTBN4-203ENST00000392023 BCL2L13Q9BXK5 485 aa27.62■■■□□ 2.01
SPTBN4-203ENST00000392023 EMILIN1Q9Y6C2 1016 aa27.62■■■□□ 2.01
SPTBN4-203ENST00000392023 FRAT1Q92837 279 aaPredicted RBP27.61■■■□□ 2.01
SPTBN4-203ENST00000392023 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
SPTBN4-203ENST00000392023 COL3A1P02461 1466 aaPredicted RBP27.6■■■□□ 2.01
SPTBN4-203ENST00000392023 ANKRD26Q9UPS8 1709 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 WDR63Q8IWG1 891 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 ATP7BP35670 1465 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 KIF20BQ96Q89 1820 aa27.59■■■□□ 2.01
SPTBN4-203ENST00000392023 MED14O60244 1454 aa27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 TMPOP42166 694 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 TSR2Q969E8 191 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2.01
SPTBN4-203ENST00000392023 MAPK8IP3Q9UPT6 1336 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 RRS1Q15050 365 aaKnown RBP27.57■■■□□ 2
SPTBN4-203ENST00000392023 C3P01024 1663 aa27.57■■■□□ 2
SPTBN4-203ENST00000392023 CANXP27824 592 aaKnown RBP27.57■■■□□ 2
SPTBN4-203ENST00000392023 HMOX1P09601 288 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 TECPR2O15040 1411 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 CCDC27Q2M243 656 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 PANK1Q8TE04 598 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 SIRT1Q96EB6 747 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
SPTBN4-203ENST00000392023 AMOTL2Q9Y2J4 779 aa27.55■■■□□ 2
SPTBN4-203ENST00000392023 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
SPTBN4-203ENST00000392023 PTPRUQ92729 1446 aa27.54■■■□□ 2
SPTBN4-203ENST00000392023 TNNQ9UQP3 1299 aa27.54■■■□□ 2
SPTBN4-203ENST00000392023 MAP2P11137 1827 aaKnown RBP27.54■■■□□ 2
SPTBN4-203ENST00000392023 RARSP54136 660 aaKnown RBP27.53■■■□□ 2
SPTBN4-203ENST00000392023 RIPK4P57078 832 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 PNPLA6Q8IY17 1366 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 CPS1P31327 1500 aa27.53■■■□□ 2
SPTBN4-203ENST00000392023 EDC4Q6P2E9 1401 aaKnown RBP27.52■■■□□ 2
SPTBN4-203ENST00000392023 COG3Q96JB2 828 aa27.51■■■□□ 2
SPTBN4-203ENST00000392023 COG6Q9Y2V7 657 aa27.51■■■□□ 2
SPTBN4-203ENST00000392023 PRKAR2BP31323 418 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 KNDC1Q76NI1 1749 aa27.5■■□□□ 1.99
SPTBN4-203ENST00000392023 ACEP12821 1306 aa27.49■■□□□ 1.99
SPTBN4-203ENST00000392023 SOX12O15370 315 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 THEMISQ8N1K5 641 aaPredicted RBP27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 MYH16Q9H6N6 1097 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 PHACTR3Q96KR7 559 aa27.48■■□□□ 1.99
SPTBN4-203ENST00000392023 CLUAP1Q96AJ1 413 aa27.47■■□□□ 1.99
SPTBN4-203ENST00000392023 ADGRB2O60241 1585 aa27.47■■□□□ 1.99
SPTBN4-203ENST00000392023 KDM2BQ8NHM5 1336 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 UBE2Q2Q8WVN8 375 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 EXOSC9Q06265 439 aaKnown RBP27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 RSPH6AQ9H0K4 717 aa27.46■■□□□ 1.99
SPTBN4-203ENST00000392023 TCERG1O14776 1098 aaKnown RBP27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 CDC42BPGQ6DT37 1551 aa27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
SPTBN4-203ENST00000392023 FCHSD2O94868 740 aa27.44■■□□□ 1.98
SPTBN4-203ENST00000392023 RLBP1P12271 317 aa27.43■■□□□ 1.98
SPTBN4-203ENST00000392023 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 IL13P35225 146 aa27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 THUMPD2Q9BTF0 503 aaKnown RBP27.42■■□□□ 1.98
SPTBN4-203ENST00000392023 TBX22Q9Y458 520 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 PDE4AP27815 886 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 PDE3AQ14432 1141 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 TTC21BQ7Z4L5 1316 aa27.41■■□□□ 1.98
SPTBN4-203ENST00000392023 CENPQQ7L2Z9 268 aaPredicted RBP27.4■■□□□ 1.98
SPTBN4-203ENST00000392023 RBM33Q96EV2 1170 aaKnown RBP27.4■■□□□ 1.98
SPTBN4-203ENST00000392023 IGHDP01880 384 aa27.39■■□□□ 1.98
SPTBN4-203ENST00000392023 LRRC7Q96NW7 1537 aa27.39■■□□□ 1.98
SPTBN4-203ENST00000392023 NPM2Q86SE8 214 aaKnown RBP27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 SLIT1O75093 1534 aa27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
SPTBN4-203ENST00000392023 MON2Q7Z3U7 1717 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 NEFMP07197 916 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 KCNA6P17658 529 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
SPTBN4-203ENST00000392023 NCBP3Q53F19 620 aaKnown RBP27.36■■□□□ 1.97
SPTBN4-203ENST00000392023 RGS3P49796 1198 aa27.36■■□□□ 1.97
SPTBN4-203ENST00000392023 AKAP12Q02952 1782 aa27.35■■□□□ 1.97
SPTBN4-203ENST00000392023 PLEKHG3A1L390 1219 aa27.35■■□□□ 1.97
SPTBN4-203ENST00000392023 SMC4Q9NTJ3 1288 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 BACH2Q9BYV9 841 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 AATKQ6ZMQ8 1374 aa27.33■■□□□ 1.97
SPTBN4-203ENST00000392023 NGDNQ8NEJ9 315 aaKnown RBP27.32■■□□□ 1.96
SPTBN4-203ENST00000392023 SSH1Q8WYL5 1049 aa27.32■■□□□ 1.96
SPTBN4-203ENST00000392023 AEBP1Q8IUX7 1158 aa27.31■■□□□ 1.96
SPTBN4-203ENST00000392023 NFE2L2Q16236 605 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 NOP58Q9Y2X3 529 aaKnown RBP27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 USP6P35125 1406 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 FAM83GA6ND36 823 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 MS4A1P11836 297 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 HSP90AB2PQ58FF8 381 aa27.3■■□□□ 1.96
SPTBN4-203ENST00000392023 RGPD8O14715 1765 aaPredicted RBP27.29■■□□□ 1.96
SPTBN4-203ENST00000392023 CDK12Q9NYV4 1490 aaPredicted RBP27.28■■□□□ 1.96
SPTBN4-203ENST00000392023 DCTN1Q14203 1278 aa27.28■■□□□ 1.96
SPTBN4-203ENST00000392023 EIF4A2Q14240 407 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms