RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
TNFSF13-203ENST00000380535 FYB1O15117 783 aa18.33■□□□□ 0.52
TNFSF13-203ENST00000380535 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
TNFSF13-203ENST00000380535 ADAMTS8Q9UP79 889 aa18.31■□□□□ 0.52
TNFSF13-203ENST00000380535 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
TNFSF13-203ENST00000380535 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
TNFSF13-203ENST00000380535 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
TNFSF13-203ENST00000380535 KCNA6P17658 529 aa18.3■□□□□ 0.52
TNFSF13-203ENST00000380535 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
TNFSF13-203ENST00000380535 MTHFSP49914 203 aa18.28■□□□□ 0.52
TNFSF13-203ENST00000380535 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-203ENST00000380535 GGNBP2Q9H3C7 697 aa18.27■□□□□ 0.52
TNFSF13-203ENST00000380535 NALCNQ8IZF0 1738 aa18.27■□□□□ 0.51
TNFSF13-203ENST00000380535 PDE4CQ08493 712 aa18.27■□□□□ 0.51
TNFSF13-203ENST00000380535 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
TNFSF13-203ENST00000380535 ADGRL3Q9HAR2 1447 aa18.26■□□□□ 0.51
TNFSF13-203ENST00000380535 TTC21AQ8NDW8 1320 aa18.26■□□□□ 0.51
TNFSF13-203ENST00000380535 USP6P35125 1406 aa18.25■□□□□ 0.51
TNFSF13-203ENST00000380535 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
TNFSF13-203ENST00000380535 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
TNFSF13-203ENST00000380535 ACEP12821 1306 aa18.24■□□□□ 0.51
TNFSF13-203ENST00000380535 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
TNFSF13-203ENST00000380535 COG3Q96JB2 828 aa18.24■□□□□ 0.51
TNFSF13-203ENST00000380535 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
TNFSF13-203ENST00000380535 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-203ENST00000380535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
TNFSF13-203ENST00000380535 COL3A1P02461 1466 aaPredicted RBP18.22■□□□□ 0.51
TNFSF13-203ENST00000380535 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
TNFSF13-203ENST00000380535 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
TNFSF13-203ENST00000380535 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
TNFSF13-203ENST00000380535 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
TNFSF13-203ENST00000380535 RGPD8O14715 1765 aaPredicted RBP18.21■□□□□ 0.51
TNFSF13-203ENST00000380535 SSH2Q76I76 1423 aa18.21■□□□□ 0.5
TNFSF13-203ENST00000380535 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
TNFSF13-203ENST00000380535 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
TNFSF13-203ENST00000380535 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-203ENST00000380535 USP54Q70EL1 1684 aa18.2■□□□□ 0.5
TNFSF13-203ENST00000380535 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
TNFSF13-203ENST00000380535 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
TNFSF13-203ENST00000380535 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-203ENST00000380535 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
TNFSF13-203ENST00000380535 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
TNFSF13-203ENST00000380535 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
TNFSF13-203ENST00000380535 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-203ENST00000380535 NME9Q86XW9 330 aa18.17■□□□□ 0.5
TNFSF13-203ENST00000380535 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
TNFSF13-203ENST00000380535 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
TNFSF13-203ENST00000380535 IQSEC2Q5JU85 1478 aa18.15■□□□□ 0.5
TNFSF13-203ENST00000380535 RBM19Q9Y4C8 960 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-203ENST00000380535 GOLGA2Q08379 1002 aa18.14■□□□□ 0.49
TNFSF13-203ENST00000380535 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
TNFSF13-203ENST00000380535 DCCP43146 1447 aa18.14■□□□□ 0.49
TNFSF13-203ENST00000380535 KIF1AQ12756 1690 aa18.13■□□□□ 0.49
TNFSF13-203ENST00000380535 CCDC27Q2M243 656 aa18.13■□□□□ 0.49
TNFSF13-203ENST00000380535 APAF1O14727 1248 aa18.13■□□□□ 0.49
TNFSF13-203ENST00000380535 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
TNFSF13-203ENST00000380535 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNFSF13-203ENST00000380535 LMTK3Q96Q04 1460 aa18.12■□□□□ 0.49
TNFSF13-203ENST00000380535 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
TNFSF13-203ENST00000380535 PROSER2Q86WR7 435 aaPredicted RBP18.12■□□□□ 0.49
TNFSF13-203ENST00000380535 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
TNFSF13-203ENST00000380535 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
TNFSF13-203ENST00000380535 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
TNFSF13-203ENST00000380535 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
TNFSF13-203ENST00000380535 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
TNFSF13-203ENST00000380535 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
TNFSF13-203ENST00000380535 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 FCHSD2O94868 740 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 NEFMP07197 916 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
TNFSF13-203ENST00000380535 E9PSI1 815 aa18.09■□□□□ 0.49
TNFSF13-203ENST00000380535 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
TNFSF13-203ENST00000380535 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
TNFSF13-203ENST00000380535 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.48
TNFSF13-203ENST00000380535 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
TNFSF13-203ENST00000380535 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
TNFSF13-203ENST00000380535 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
TNFSF13-203ENST00000380535 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
TNFSF13-203ENST00000380535 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
TNFSF13-203ENST00000380535 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-203ENST00000380535 STRCQ7RTU9 1775 aa18.06■□□□□ 0.48
TNFSF13-203ENST00000380535 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 ZRANB1Q9UGI0 708 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 IL13P35225 146 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 TAF7LQ5H9L4 462 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
TNFSF13-203ENST00000380535 SBNO1A3KN83 1393 aa18.03■□□□□ 0.48
TNFSF13-203ENST00000380535 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
TNFSF13-203ENST00000380535 MARF1Q9Y4F3 1742 aaKnown RBP18.02■□□□□ 0.48
TNFSF13-203ENST00000380535 ATF3P18847 181 aa18.02■□□□□ 0.48
TNFSF13-203ENST00000380535 FLT4P35916 1363 aa18.02■□□□□ 0.48
TNFSF13-203ENST00000380535 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
TNFSF13-203ENST00000380535 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms