RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 TRIM35Q9UPQ4 493 aa24.02■■□□□ 1.44
CDK11A-205ENST00000378633 HDGFL2Q7Z4V5 671 aaPredicted RBP24.01■■□□□ 1.43
CDK11A-205ENST00000378633 TSR2Q969E8 191 aaKnown RBP24.01■■□□□ 1.43
CDK11A-205ENST00000378633 MVPQ14764 893 aaKnown RBP23.99■■□□□ 1.43
CDK11A-205ENST00000378633 ZKSCAN2Q63HK3 967 aa23.99■■□□□ 1.43
CDK11A-205ENST00000378633 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
CDK11A-205ENST00000378633 PNPLA6Q8IY17 1366 aa23.99■■□□□ 1.43
CDK11A-205ENST00000378633 USP19O94966 1318 aa23.98■■□□□ 1.43
CDK11A-205ENST00000378633 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
CDK11A-205ENST00000378633 CABP1Q9NZU7 370 aa23.98■■□□□ 1.43
CDK11A-205ENST00000378633 EXOSC9Q06265 439 aaKnown RBP23.97■■□□□ 1.43
CDK11A-205ENST00000378633 IL16Q14005 1332 aa23.97■■□□□ 1.43
CDK11A-205ENST00000378633 DIAPH1O60610 1272 aaKnown RBP23.96■■□□□ 1.43
CDK11A-205ENST00000378633 REREQ9P2R6 1566 aa23.96■■□□□ 1.43
CDK11A-205ENST00000378633 ZMYM3Q14202 1370 aa23.96■■□□□ 1.43
CDK11A-205ENST00000378633 RWDD1Q9H446 243 aaPredicted RBP23.96■■□□□ 1.43
CDK11A-205ENST00000378633 PPP6R1Q9UPN7 881 aa23.96■■□□□ 1.43
CDK11A-205ENST00000378633 FAM69CQ0P6D2 419 aa23.95■■□□□ 1.43
CDK11A-205ENST00000378633 DZIP1LQ8IYY4 767 aaKnown RBP23.95■■□□□ 1.43
CDK11A-205ENST00000378633 AGLP35573 1532 aa23.95■■□□□ 1.42
CDK11A-205ENST00000378633 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.42
CDK11A-205ENST00000378633 DLC1Q96QB1 1528 aa23.95■■□□□ 1.42
CDK11A-205ENST00000378633 FTSJ3Q8IY81 847 aaKnown RBP23.94■■□□□ 1.42
CDK11A-205ENST00000378633 SMC4Q9NTJ3 1288 aa23.94■■□□□ 1.42
CDK11A-205ENST00000378633 PDZRN3Q9UPQ7 1066 aa23.94■■□□□ 1.42
CDK11A-205ENST00000378633 A2ML1A8K2U0 1454 aa23.93■■□□□ 1.42
CDK11A-205ENST00000378633 SEC24BO95487 1268 aa23.93■■□□□ 1.42
CDK11A-205ENST00000378633 RIPK4P57078 832 aa23.93■■□□□ 1.42
CDK11A-205ENST00000378633 PNNQ9H307 717 aaKnown RBP23.93■■□□□ 1.42
CDK11A-205ENST00000378633 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
CDK11A-205ENST00000378633 NFKBIBQ15653 356 aa23.92■■□□□ 1.42
CDK11A-205ENST00000378633 SSH1Q8WYL5 1049 aa23.91■■□□□ 1.42
CDK11A-205ENST00000378633 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
CDK11A-205ENST00000378633 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
CDK11A-205ENST00000378633 ATP7BP35670 1465 aa23.9■■□□□ 1.42
CDK11A-205ENST00000378633 TRIM27P14373 513 aa23.9■■□□□ 1.42
CDK11A-205ENST00000378633 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
CDK11A-205ENST00000378633 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.42
CDK11A-205ENST00000378633 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
CDK11A-205ENST00000378633 FCHSD2O94868 740 aa23.89■■□□□ 1.41
CDK11A-205ENST00000378633 ATF7IPQ6VMQ6 1270 aa23.87■■□□□ 1.41
CDK11A-205ENST00000378633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.41
CDK11A-205ENST00000378633 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
CDK11A-205ENST00000378633 LRRC7Q96NW7 1537 aa23.86■■□□□ 1.41
CDK11A-205ENST00000378633 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
CDK11A-205ENST00000378633 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
CDK11A-205ENST00000378633 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
CDK11A-205ENST00000378633 NOB1Q9ULX3 412 aaKnown RBP23.85■■□□□ 1.41
CDK11A-205ENST00000378633 DDX19BQ9UMR2 479 aa23.85■■□□□ 1.41
CDK11A-205ENST00000378633 TSPOAP1O95153 1857 aa23.85■■□□□ 1.41
CDK11A-205ENST00000378633 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
CDK11A-205ENST00000378633 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
CDK11A-205ENST00000378633 HDAC1Q13547 482 aaPredicted RBP23.83■■□□□ 1.41
CDK11A-205ENST00000378633 FBLN1P23142 703 aa23.83■■□□□ 1.4
CDK11A-205ENST00000378633 ITPRIPQ8IWB1 547 aa23.83■■□□□ 1.4
CDK11A-205ENST00000378633 PRKAR2BP31323 418 aa23.82■■□□□ 1.4
CDK11A-205ENST00000378633 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
CDK11A-205ENST00000378633 CPSF1Q10570 1443 aaKnown RBP23.81■■□□□ 1.4
CDK11A-205ENST00000378633 ALDH1L2Q3SY69 923 aa23.8■■□□□ 1.4
CDK11A-205ENST00000378633 NRXN3Q9Y4C0 1643 aa23.8■■□□□ 1.4
CDK11A-205ENST00000378633 EDC4Q6P2E9 1401 aaKnown RBP23.79■■□□□ 1.4
CDK11A-205ENST00000378633 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
CDK11A-205ENST00000378633 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
CDK11A-205ENST00000378633 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
CDK11A-205ENST00000378633 UPF2Q9HAU5 1272 aaKnown RBP23.79■■□□□ 1.4
CDK11A-205ENST00000378633 BECN1Q14457 450 aa23.78■■□□□ 1.4
CDK11A-205ENST00000378633 TBC1D32Q96NH3 1257 aa23.78■■□□□ 1.4
CDK11A-205ENST00000378633 MLECQ14165 292 aa23.78■■□□□ 1.4
CDK11A-205ENST00000378633 MAP2P11137 1827 aaKnown RBP23.78■■□□□ 1.4
CDK11A-205ENST00000378633 PPIP5K1Q6PFW1 1433 aa23.77■■□□□ 1.4
CDK11A-205ENST00000378633 ZBTB40Q9NUA8 1239 aa23.77■■□□□ 1.4
CDK11A-205ENST00000378633 METP08581 1390 aa23.76■■□□□ 1.39
CDK11A-205ENST00000378633 NFE2L2Q16236 605 aa23.76■■□□□ 1.39
CDK11A-205ENST00000378633 GSE1Q14687 1217 aa23.76■■□□□ 1.39
CDK11A-205ENST00000378633 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDK11A-205ENST00000378633 PHACTR3Q96KR7 559 aa23.76■■□□□ 1.39
CDK11A-205ENST00000378633 SMC5Q8IY18 1101 aa23.75■■□□□ 1.39
CDK11A-205ENST00000378633 ZNF428Q96B54 188 aa23.75■■□□□ 1.39
CDK11A-205ENST00000378633 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
CDK11A-205ENST00000378633 FRAT2O75474 233 aaPredicted RBP23.74■■□□□ 1.39
CDK11A-205ENST00000378633 HMOX1P09601 288 aa23.74■■□□□ 1.39
CDK11A-205ENST00000378633 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
CDK11A-205ENST00000378633 NME9Q86XW9 330 aa23.74■■□□□ 1.39
CDK11A-205ENST00000378633 IL13P35225 146 aa23.74■■□□□ 1.39
CDK11A-205ENST00000378633 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
CDK11A-205ENST00000378633 CDK12Q9NYV4 1490 aaPredicted RBP23.73■■□□□ 1.39
CDK11A-205ENST00000378633 TXNDC2Q86VQ3 553 aa23.72■■□□□ 1.39
CDK11A-205ENST00000378633 NUDT16Q96DE0 195 aaKnown RBP23.71■■□□□ 1.39
CDK11A-205ENST00000378633 CALD1Q05682 793 aaKnown RBP23.71■■□□□ 1.39
CDK11A-205ENST00000378633 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
CDK11A-205ENST00000378633 SIRT1Q96EB6 747 aa23.7■■□□□ 1.38
CDK11A-205ENST00000378633 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
CDK11A-205ENST00000378633 TECPR2O15040 1411 aa23.69■■□□□ 1.38
CDK11A-205ENST00000378633 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
CDK11A-205ENST00000378633 VAMP4O75379 141 aa23.69■■□□□ 1.38
CDK11A-205ENST00000378633 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
CDK11A-205ENST00000378633 IFT57Q9NWB7 429 aa23.68■■□□□ 1.38
CDK11A-205ENST00000378633 CPS1P31327 1500 aa23.68■■□□□ 1.38
CDK11A-205ENST00000378633 MON2Q7Z3U7 1717 aa23.68■■□□□ 1.38
CDK11A-205ENST00000378633 GNAI1P63096 354 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms