RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
ABCF1-202ENST00000376545 FYB1O15117 783 aa13.68□□□□□ -0.22
ABCF1-202ENST00000376545 MVPQ14764 893 aaKnown RBP13.68□□□□□ -0.22
ABCF1-202ENST00000376545 SEC24BO95487 1268 aa13.68□□□□□ -0.22
ABCF1-202ENST00000376545 TMPOP42166 694 aaKnown RBP13.68□□□□□ -0.22
ABCF1-202ENST00000376545 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
ABCF1-202ENST00000376545 ZKSCAN2Q63HK3 967 aa13.66□□□□□ -0.22
ABCF1-202ENST00000376545 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
ABCF1-202ENST00000376545 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
ABCF1-202ENST00000376545 AGLP35573 1532 aa13.66□□□□□ -0.22
ABCF1-202ENST00000376545 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
ABCF1-202ENST00000376545 GSE1Q14687 1217 aa13.65□□□□□ -0.22
ABCF1-202ENST00000376545 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
ABCF1-202ENST00000376545 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-202ENST00000376545 DIP2BQ9P265 1576 aa13.64□□□□□ -0.23
ABCF1-202ENST00000376545 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
ABCF1-202ENST00000376545 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
ABCF1-202ENST00000376545 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
ABCF1-202ENST00000376545 BCL2L13Q9BXK5 485 aa13.64□□□□□ -0.23
ABCF1-202ENST00000376545 ATP7BP35670 1465 aa13.64□□□□□ -0.23
ABCF1-202ENST00000376545 SPATA31D1Q6ZQQ2 1576 aa13.64□□□□□ -0.23
ABCF1-202ENST00000376545 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
ABCF1-202ENST00000376545 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
ABCF1-202ENST00000376545 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
ABCF1-202ENST00000376545 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
ABCF1-202ENST00000376545 STK26Q9P289 416 aa13.63□□□□□ -0.23
ABCF1-202ENST00000376545 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
ABCF1-202ENST00000376545 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
ABCF1-202ENST00000376545 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
ABCF1-202ENST00000376545 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
ABCF1-202ENST00000376545 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
ABCF1-202ENST00000376545 TRIM27P14373 513 aa13.62□□□□□ -0.23
ABCF1-202ENST00000376545 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
ABCF1-202ENST00000376545 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
ABCF1-202ENST00000376545 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
ABCF1-202ENST00000376545 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
ABCF1-202ENST00000376545 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
ABCF1-202ENST00000376545 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
ABCF1-202ENST00000376545 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
ABCF1-202ENST00000376545 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
ABCF1-202ENST00000376545 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
ABCF1-202ENST00000376545 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
ABCF1-202ENST00000376545 FCHSD2O94868 740 aa13.6□□□□□ -0.23
ABCF1-202ENST00000376545 HDGFL2Q7Z4V5 671 aaPredicted RBP13.6□□□□□ -0.23
ABCF1-202ENST00000376545 DDX19BQ9UMR2 479 aa13.6□□□□□ -0.23
ABCF1-202ENST00000376545 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
ABCF1-202ENST00000376545 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 ANTXR1Q9H6X2 564 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
ABCF1-202ENST00000376545 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
ABCF1-202ENST00000376545 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 POGKQ9P215 609 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
ABCF1-202ENST00000376545 BECN1Q14457 450 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
ABCF1-202ENST00000376545 FTSJ3Q8IY81 847 aaKnown RBP13.59□□□□□ -0.23
ABCF1-202ENST00000376545 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
ABCF1-202ENST00000376545 RIPK4P57078 832 aa13.58□□□□□ -0.24
ABCF1-202ENST00000376545 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
ABCF1-202ENST00000376545 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
ABCF1-202ENST00000376545 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
ABCF1-202ENST00000376545 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
ABCF1-202ENST00000376545 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
ABCF1-202ENST00000376545 NOB1Q9ULX3 412 aaKnown RBP13.57□□□□□ -0.24
ABCF1-202ENST00000376545 AKAP12Q02952 1782 aa13.57□□□□□ -0.24
ABCF1-202ENST00000376545 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
ABCF1-202ENST00000376545 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
ABCF1-202ENST00000376545 PIK3R4Q99570 1358 aa13.56□□□□□ -0.24
ABCF1-202ENST00000376545 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
ABCF1-202ENST00000376545 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
ABCF1-202ENST00000376545 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
ABCF1-202ENST00000376545 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
ABCF1-202ENST00000376545 RIMS2Q9UQ26 1411 aa13.55□□□□□ -0.24
ABCF1-202ENST00000376545 TMEM57Q8N5G2 664 aa13.55□□□□□ -0.24
ABCF1-202ENST00000376545 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
ABCF1-202ENST00000376545 C3P01024 1663 aa13.54□□□□□ -0.24
ABCF1-202ENST00000376545 IPO8O15397 1037 aaKnown RBP13.54□□□□□ -0.24
ABCF1-202ENST00000376545 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
ABCF1-202ENST00000376545 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
ABCF1-202ENST00000376545 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
ABCF1-202ENST00000376545 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
ABCF1-202ENST00000376545 TECPR2O15040 1411 aa13.53□□□□□ -0.24
ABCF1-202ENST00000376545 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
ABCF1-202ENST00000376545 ZNF853P0CG23 659 aa13.52□□□□□ -0.24
ABCF1-202ENST00000376545 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.24
ABCF1-202ENST00000376545 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
ABCF1-202ENST00000376545 CPS1P31327 1500 aa13.52□□□□□ -0.25
ABCF1-202ENST00000376545 NUCB1Q02818 461 aa13.52□□□□□ -0.25
ABCF1-202ENST00000376545 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
ABCF1-202ENST00000376545 SIRT1Q96EB6 747 aa13.51□□□□□ -0.25
ABCF1-202ENST00000376545 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
ABCF1-202ENST00000376545 IL13P35225 146 aa13.51□□□□□ -0.25
ABCF1-202ENST00000376545 ITSN1Q15811 1721 aa13.51□□□□□ -0.25
ABCF1-202ENST00000376545 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
ABCF1-202ENST00000376545 VAMP4O75379 141 aa13.5□□□□□ -0.25
ABCF1-202ENST00000376545 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
ABCF1-202ENST00000376545 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
ABCF1-202ENST00000376545 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
ABCF1-202ENST00000376545 IFT57Q9NWB7 429 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms