RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 PTPRKQ15262 1439 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 GAS2L2Q8NHY3 880 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 TSPY26PQ9H489 355 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 TSPYL4Q9UJ04 414 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 CCDC73Q6ZRK6 1079 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 UBTFL1P0CB47 393 aaPredicted RBP14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 TEX35Q5T0J7 233 aa14.23□□□□□ -0.13
CDC42BPA-202ENST00000366764 PRKAR2BP31323 418 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 SASS6Q6UVJ0 657 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 CCDC30Q5VVM6 783 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 CABP2Q9NPB3 220 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 ERC1Q8IUD2 1116 aa14.22□□□□□ -0.13
CDC42BPA-202ENST00000366764 GGNBP2Q9H3C7 697 aa14.21□□□□□ -0.13
CDC42BPA-202ENST00000366764 GNAI2P04899 355 aa14.21□□□□□ -0.13
CDC42BPA-202ENST00000366764 ARGLU1Q9NWB6 273 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPA-202ENST00000366764 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.13
CDC42BPA-202ENST00000366764 RARSP54136 660 aaKnown RBP14.21□□□□□ -0.13
CDC42BPA-202ENST00000366764 TSR1Q2NL82 804 aaKnown RBP14.21□□□□□ -0.14
CDC42BPA-202ENST00000366764 BICD2Q8TD16 824 aa14.21□□□□□ -0.14
CDC42BPA-202ENST00000366764 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 CCP110O43303 1012 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 IL16Q14005 1332 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 NEK4P51957 841 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 CCDC70Q6NSX1 233 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 ARID3AQ99856 593 aa14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 NUP153P49790 1475 aaKnown RBP14.2□□□□□ -0.14
CDC42BPA-202ENST00000366764 NPHP1O15259 732 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 AEBP1Q8IUX7 1158 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 VPS37CA5D8V6 355 aaPredicted RBP14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 ANKRD20A12PQ8NF67 263 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 SLC12A5Q9H2X9 1139 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 ANKRD1Q15327 319 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 ABCA5Q8WWZ7 1642 aa14.19□□□□□ -0.14
CDC42BPA-202ENST00000366764 HMOX1P09601 288 aa14.18□□□□□ -0.14
CDC42BPA-202ENST00000366764 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
CDC42BPA-202ENST00000366764 CLASRPQ8N2M8 674 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-202ENST00000366764 CPLX1O14810 134 aa14.18□□□□□ -0.14
CDC42BPA-202ENST00000366764 RPAP2Q8IXW5 612 aaPredicted RBP14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 ZMYM4Q5VZL5 1548 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 CCDC192P0DO97 292 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 MCM5P33992 734 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
CDC42BPA-202ENST00000366764 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
CDC42BPA-202ENST00000366764 TRIM29Q14134 588 aa14.16□□□□□ -0.14
CDC42BPA-202ENST00000366764 SYNE3Q6ZMZ3 975 aa14.16□□□□□ -0.14
CDC42BPA-202ENST00000366764 TBC1D32Q96NH3 1257 aa14.16□□□□□ -0.14
CDC42BPA-202ENST00000366764 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
CDC42BPA-202ENST00000366764 COL17A1Q9UMD9 1497 aaPredicted RBP14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 BMP2KLQ5H9B9 411 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 IPO7O95373 1038 aaKnown RBP14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 TRDNQ13061 729 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 LRRCC1Q9C099 1032 aa14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 AKAP17AQ02040 695 aaKnown RBP14.15□□□□□ -0.14
CDC42BPA-202ENST00000366764 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.15
CDC42BPA-202ENST00000366764 KINO60870 393 aaKnown RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 CCDC27Q2M243 656 aa14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 ZNF771Q7L3S4 317 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 R3HCC1Q9Y3T6 440 aaKnown RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPA-202ENST00000366764 NOC3LQ8WTT2 800 aaKnown RBP14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 ACBD3Q9H3P7 528 aa14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
CDC42BPA-202ENST00000366764 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
CDC42BPA-202ENST00000366764 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
CDC42BPA-202ENST00000366764 HOMER1Q86YM7 354 aa14.12□□□□□ -0.15
CDC42BPA-202ENST00000366764 ZSCAN31Q96LW9 406 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms