RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 GAS2L3Q86XJ1 694 aa22.26■■□□□ 1.15
CTSB-202ENST00000353047 CDC45O75419 566 aa22.25■■□□□ 1.15
CTSB-202ENST00000353047 NEK4P51957 841 aa22.25■■□□□ 1.15
CTSB-202ENST00000353047 PHACTR3Q96KR7 559 aa22.25■■□□□ 1.15
CTSB-202ENST00000353047 CDK19Q9BWU1 502 aa22.25■■□□□ 1.15
CTSB-202ENST00000353047 CFAP65Q6ZU64 1925 aaKnown RBP22.24■■□□□ 1.15
CTSB-202ENST00000353047 ST18O60284 1047 aa22.24■■□□□ 1.15
CTSB-202ENST00000353047 GDPD2Q9HCC8 539 aa22.24■■□□□ 1.15
CTSB-202ENST00000353047 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
CTSB-202ENST00000353047 MAP4K4O95819 1239 aaPredicted RBP22.23■■□□□ 1.15
CTSB-202ENST00000353047 OS9Q13438 667 aaPredicted RBP22.23■■□□□ 1.15
CTSB-202ENST00000353047 OTUD7AQ8TE49 926 aaPredicted RBP22.23■■□□□ 1.15
CTSB-202ENST00000353047 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
CTSB-202ENST00000353047 UBE2Q2Q8WVN8 375 aa22.22■■□□□ 1.15
CTSB-202ENST00000353047 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
CTSB-202ENST00000353047 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
CTSB-202ENST00000353047 MCM10Q7L590 875 aa22.22■■□□□ 1.15
CTSB-202ENST00000353047 SKOR2Q2VWA4 1001 aaPredicted RBP22.21■■□□□ 1.15
CTSB-202ENST00000353047 NUTM2GQ5VZR2 741 aa22.21■■□□□ 1.15
CTSB-202ENST00000353047 F6X3S4 739 aa22.21■■□□□ 1.15
CTSB-202ENST00000353047 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
CTSB-202ENST00000353047 RTF1Q92541 710 aaKnown RBP22.21■■□□□ 1.15
CTSB-202ENST00000353047 FYB1O15117 783 aa22.2■■□□□ 1.14
CTSB-202ENST00000353047 UPF3BQ9BZI7 483 aaKnown RBP22.2■■□□□ 1.14
CTSB-202ENST00000353047 EXOC6BQ9Y2D4 811 aa22.2■■□□□ 1.14
CTSB-202ENST00000353047 ABCC10Q5T3U5 1492 aa22.2■■□□□ 1.14
CTSB-202ENST00000353047 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.14
CTSB-202ENST00000353047 NME9Q86XW9 330 aa22.19■■□□□ 1.14
CTSB-202ENST00000353047 NCKAP5LQ9HCH0 1330 aa22.19■■□□□ 1.14
CTSB-202ENST00000353047 SYCE3A1L190 88 aa22.19■■□□□ 1.14
CTSB-202ENST00000353047 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
CTSB-202ENST00000353047 IDI1Q13907 227 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
CTSB-202ENST00000353047 SULT6B1Q6IMI4 303 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 STAC3Q96MF2 364 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 NINLQ9Y2I6 1382 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
CTSB-202ENST00000353047 ZGPATQ8N5A5 531 aaKnown RBP22.18■■□□□ 1.14
CTSB-202ENST00000353047 KCNJ4P48050 445 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 GNAI1P63096 354 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 NUCB1Q02818 461 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 PKP1Q13835 747 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 CCDC27Q2M243 656 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 DDX54Q8TDD1 881 aaKnown RBP22.17■■□□□ 1.14
CTSB-202ENST00000353047 COG3Q96JB2 828 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 C8orf58Q8NAV2 365 aa22.17■■□□□ 1.14
CTSB-202ENST00000353047 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
CTSB-202ENST00000353047 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
CTSB-202ENST00000353047 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
CTSB-202ENST00000353047 AAMPQ13685 434 aa22.16■■□□□ 1.14
CTSB-202ENST00000353047 INSRP06213 1382 aa22.16■■□□□ 1.14
CTSB-202ENST00000353047 PKNOX2Q96KN3 472 aa22.16■■□□□ 1.14
CTSB-202ENST00000353047 SHANK2Q9UPX8 1470 aa22.16■■□□□ 1.14
CTSB-202ENST00000353047 SLC4A2P04920 1241 aa22.15■■□□□ 1.14
CTSB-202ENST00000353047 BAG4O95429 457 aaKnown RBP22.15■■□□□ 1.14
CTSB-202ENST00000353047 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
CTSB-202ENST00000353047 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
CTSB-202ENST00000353047 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.13
CTSB-202ENST00000353047 MBIPQ9NS73 344 aa22.14■■□□□ 1.13
CTSB-202ENST00000353047 CCDC9Q9Y3X0 531 aaKnown RBP22.14■■□□□ 1.13
CTSB-202ENST00000353047 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
CTSB-202ENST00000353047 CLCN1P35523 988 aa22.14■■□□□ 1.13
CTSB-202ENST00000353047 HDAC1Q13547 482 aaPredicted RBP22.14■■□□□ 1.13
CTSB-202ENST00000353047 SMC5Q8IY18 1101 aa22.14■■□□□ 1.13
CTSB-202ENST00000353047 FKBP5Q13451 457 aaPredicted RBP22.13■■□□□ 1.13
CTSB-202ENST00000353047 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
CTSB-202ENST00000353047 ZMYND15Q9H091 742 aa22.13■■□□□ 1.13
CTSB-202ENST00000353047 IL1RAPL2Q9NP60 686 aa22.13■■□□□ 1.13
CTSB-202ENST00000353047 ADGBQ8N7X0 1667 aa22.12■■□□□ 1.13
CTSB-202ENST00000353047 NAP1L2Q9ULW6 460 aaPredicted RBP22.11■■□□□ 1.13
CTSB-202ENST00000353047 ERBB4Q15303 1308 aa22.1■■□□□ 1.13
CTSB-202ENST00000353047 MCCP23508 829 aa22.1■■□□□ 1.13
CTSB-202ENST00000353047 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
CTSB-202ENST00000353047 BMP2KLQ5H9B9 411 aa22.09■■□□□ 1.13
CTSB-202ENST00000353047 NUP160Q12769 1436 aa22.09■■□□□ 1.13
CTSB-202ENST00000353047 NUCB2P80303 420 aa22.09■■□□□ 1.13
CTSB-202ENST00000353047 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
CTSB-202ENST00000353047 NFE2L2Q16236 605 aa22.08■■□□□ 1.13
CTSB-202ENST00000353047 PRDM10Q9NQV6 1147 aa22.08■■□□□ 1.13
CTSB-202ENST00000353047 ZNF830Q96NB3 372 aaPredicted RBP22.08■■□□□ 1.12
CTSB-202ENST00000353047 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.12
CTSB-202ENST00000353047 REC8O95072 547 aa22.07■■□□□ 1.12
CTSB-202ENST00000353047 TSPYL4Q9UJ04 414 aa22.07■■□□□ 1.12
CTSB-202ENST00000353047 HMMRO75330 724 aa22.07■■□□□ 1.12
CTSB-202ENST00000353047 MEIS3Q99687 375 aa22.07■■□□□ 1.12
CTSB-202ENST00000353047 RABEP1Q15276 862 aa22.06■■□□□ 1.12
CTSB-202ENST00000353047 FCHSD2O94868 740 aa22.06■■□□□ 1.12
CTSB-202ENST00000353047 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
CTSB-202ENST00000353047 CCDC173Q0VFZ6 552 aa22.06■■□□□ 1.12
CTSB-202ENST00000353047 DRC7Q8IY82 874 aa22.06■■□□□ 1.12
CTSB-202ENST00000353047 VAMP4O75379 141 aa22.06■■□□□ 1.12
CTSB-202ENST00000353047 RAB3GAP1Q15042 981 aa22.05■■□□□ 1.12
CTSB-202ENST00000353047 FAM177BA6PVY3 158 aa22.05■■□□□ 1.12
CTSB-202ENST00000353047 AMPHP49418 695 aa22.05■■□□□ 1.12
CTSB-202ENST00000353047 ZBTB7BO15156 539 aaPredicted RBP22.04■■□□□ 1.12
CTSB-202ENST00000353047 FIBPO43427 364 aa22.04■■□□□ 1.12
CTSB-202ENST00000353047 SDSP20132 328 aa22.04■■□□□ 1.12
CTSB-202ENST00000353047 PTPRTO14522 1441 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms