RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 COL3A1P02461 1466 aaPredicted RBP28.2■■■□□ 2.11
NKX2-4-201ENST00000351817 BCL2L13Q9BXK5 485 aa28.19■■■□□ 2.1
NKX2-4-201ENST00000351817 GGNBP2Q9H3C7 697 aa28.19■■■□□ 2.1
NKX2-4-201ENST00000351817 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
NKX2-4-201ENST00000351817 PRAM1Q96QH2 718 aa28.18■■■□□ 2.1
NKX2-4-201ENST00000351817 POGKQ9P215 609 aa28.18■■■□□ 2.1
NKX2-4-201ENST00000351817 MINK1Q8N4C8 1332 aaPredicted RBP28.18■■■□□ 2.1
NKX2-4-201ENST00000351817 PLEKHF1Q96S99 279 aa28.18■■■□□ 2.1
NKX2-4-201ENST00000351817 TNNQ9UQP3 1299 aa28.18■■■□□ 2.1
NKX2-4-201ENST00000351817 PCDHB15Q9Y5E8 787 aa28.17■■■□□ 2.1
NKX2-4-201ENST00000351817 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
NKX2-4-201ENST00000351817 RIMS2Q9UQ26 1411 aa28.17■■■□□ 2.1
NKX2-4-201ENST00000351817 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
NKX2-4-201ENST00000351817 FYB1O15117 783 aa28.16■■■□□ 2.1
NKX2-4-201ENST00000351817 NLRP1Q9C000 1473 aa28.15■■■□□ 2.1
NKX2-4-201ENST00000351817 TMPOP42166 694 aaKnown RBP28.14■■■□□ 2.1
NKX2-4-201ENST00000351817 ZKSCAN2Q63HK3 967 aa28.14■■■□□ 2.1
NKX2-4-201ENST00000351817 SETD1AO15047 1707 aaKnown RBP28.14■■■□□ 2.09
NKX2-4-201ENST00000351817 RWDD1Q9H446 243 aaPredicted RBP28.14■■■□□ 2.09
NKX2-4-201ENST00000351817 MVPQ14764 893 aaKnown RBP28.13■■■□□ 2.09
NKX2-4-201ENST00000351817 NFKBIBQ15653 356 aa28.13■■■□□ 2.09
NKX2-4-201ENST00000351817 USP19O94966 1318 aa28.13■■■□□ 2.09
NKX2-4-201ENST00000351817 HDGFL2Q7Z4V5 671 aaPredicted RBP28.12■■■□□ 2.09
NKX2-4-201ENST00000351817 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
NKX2-4-201ENST00000351817 IL16Q14005 1332 aa28.11■■■□□ 2.09
NKX2-4-201ENST00000351817 KIF20BQ96Q89 1820 aa28.1■■■□□ 2.09
NKX2-4-201ENST00000351817 TRIM35Q9UPQ4 493 aa28.1■■■□□ 2.09
NKX2-4-201ENST00000351817 DZIP1LQ8IYY4 767 aaKnown RBP28.1■■■□□ 2.09
NKX2-4-201ENST00000351817 TSR2Q969E8 191 aaKnown RBP28.1■■■□□ 2.09
NKX2-4-201ENST00000351817 FTSJ3Q8IY81 847 aaKnown RBP28.08■■■□□ 2.09
NKX2-4-201ENST00000351817 PNNQ9H307 717 aaKnown RBP28.08■■■□□ 2.09
NKX2-4-201ENST00000351817 PDZRN3Q9UPQ7 1066 aa28.08■■■□□ 2.09
NKX2-4-201ENST00000351817 EXOSC9Q06265 439 aaKnown RBP28.08■■■□□ 2.09
NKX2-4-201ENST00000351817 CDK19Q9BWU1 502 aa28.08■■■□□ 2.09
NKX2-4-201ENST00000351817 NRXN3Q9Y4C0 1643 aa28.07■■■□□ 2.08
NKX2-4-201ENST00000351817 PNPLA6Q8IY17 1366 aa28.07■■■□□ 2.08
NKX2-4-201ENST00000351817 DIAPH1O60610 1272 aaKnown RBP28.07■■■□□ 2.08
NKX2-4-201ENST00000351817 SMC4Q9NTJ3 1288 aa28.06■■■□□ 2.08
NKX2-4-201ENST00000351817 SEC24BO95487 1268 aa28.05■■■□□ 2.08
NKX2-4-201ENST00000351817 DLC1Q96QB1 1528 aa28.05■■■□□ 2.08
NKX2-4-201ENST00000351817 TNRQ92752 1358 aa28.03■■■□□ 2.08
NKX2-4-201ENST00000351817 CABP1Q9NZU7 370 aa28.03■■■□□ 2.08
NKX2-4-201ENST00000351817 CDC42BPGQ6DT37 1551 aa28.02■■■□□ 2.08
NKX2-4-201ENST00000351817 RIPK4P57078 832 aa28.02■■■□□ 2.08
NKX2-4-201ENST00000351817 SSH1Q8WYL5 1049 aa28.01■■■□□ 2.07
NKX2-4-201ENST00000351817 TRIM27P14373 513 aa28■■■□□ 2.07
NKX2-4-201ENST00000351817 BECN1Q14457 450 aa27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 UPF2Q9HAU5 1272 aaKnown RBP27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 DDX19BQ9UMR2 479 aa27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 ATF7IPQ6VMQ6 1270 aa27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 ATP7BP35670 1465 aa27.99■■■□□ 2.07
NKX2-4-201ENST00000351817 FCHSD2O94868 740 aa27.98■■■□□ 2.07
NKX2-4-201ENST00000351817 WAPLQ7Z5K2 1190 aa27.98■■■□□ 2.07
NKX2-4-201ENST00000351817 UBR1Q8IWV7 1749 aa27.98■■■□□ 2.07
NKX2-4-201ENST00000351817 GSE1Q14687 1217 aa27.97■■■□□ 2.07
NKX2-4-201ENST00000351817 METP08581 1390 aa27.96■■■□□ 2.07
NKX2-4-201ENST00000351817 HDAC1Q13547 482 aaPredicted RBP27.95■■■□□ 2.07
NKX2-4-201ENST00000351817 LRRC7Q96NW7 1537 aa27.95■■■□□ 2.06
NKX2-4-201ENST00000351817 NOB1Q9ULX3 412 aaKnown RBP27.94■■■□□ 2.06
NKX2-4-201ENST00000351817 KIF16BQ96L93 1317 aa27.94■■■□□ 2.06
NKX2-4-201ENST00000351817 ITPRIPQ8IWB1 547 aa27.94■■■□□ 2.06
NKX2-4-201ENST00000351817 IPO8O15397 1037 aaKnown RBP27.92■■■□□ 2.06
NKX2-4-201ENST00000351817 TBC1D32Q96NH3 1257 aa27.92■■■□□ 2.06
NKX2-4-201ENST00000351817 FAM135BQ49AJ0 1406 aa27.92■■■□□ 2.06
NKX2-4-201ENST00000351817 TMEM2Q9UHN6 1383 aa27.92■■■□□ 2.06
NKX2-4-201ENST00000351817 ALDH1L2Q3SY69 923 aa27.91■■■□□ 2.06
NKX2-4-201ENST00000351817 POLKQ9UBT6 870 aa27.91■■■□□ 2.06
NKX2-4-201ENST00000351817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
NKX2-4-201ENST00000351817 RSPH6AQ9H0K4 717 aa27.9■■■□□ 2.06
NKX2-4-201ENST00000351817 FRAT2O75474 233 aaPredicted RBP27.9■■■□□ 2.06
NKX2-4-201ENST00000351817 MAP2P11137 1827 aaKnown RBP27.89■■■□□ 2.06
NKX2-4-201ENST00000351817 PRKAR2BP31323 418 aa27.88■■■□□ 2.05
NKX2-4-201ENST00000351817 HDGFP51858 240 aaKnown RBP27.88■■■□□ 2.05
NKX2-4-201ENST00000351817 TMEM57Q8N5G2 664 aa27.88■■■□□ 2.05
NKX2-4-201ENST00000351817 KNDC1Q76NI1 1749 aa27.88■■■□□ 2.05
NKX2-4-201ENST00000351817 ZNF428Q96B54 188 aa27.87■■■□□ 2.05
NKX2-4-201ENST00000351817 PPIP5K1Q6PFW1 1433 aa27.86■■■□□ 2.05
NKX2-4-201ENST00000351817 ZBTB40Q9NUA8 1239 aa27.86■■■□□ 2.05
NKX2-4-201ENST00000351817 CEBPAP49715 358 aaPredicted RBP27.86■■■□□ 2.05
NKX2-4-201ENST00000351817 SMC5Q8IY18 1101 aa27.86■■■□□ 2.05
NKX2-4-201ENST00000351817 EDC4Q6P2E9 1401 aaKnown RBP27.85■■■□□ 2.05
NKX2-4-201ENST00000351817 TECPR2O15040 1411 aa27.85■■■□□ 2.05
NKX2-4-201ENST00000351817 CPSF1Q10570 1443 aaKnown RBP27.84■■■□□ 2.05
NKX2-4-201ENST00000351817 BRPF1P55201 1214 aaPredicted RBP27.84■■■□□ 2.05
NKX2-4-201ENST00000351817 TXNDC2Q86VQ3 553 aa27.84■■■□□ 2.05
NKX2-4-201ENST00000351817 NFE2L2Q16236 605 aa27.83■■■□□ 2.05
NKX2-4-201ENST00000351817 C3P01024 1663 aa27.82■■■□□ 2.04
NKX2-4-201ENST00000351817 CALD1Q05682 793 aaKnown RBP27.82■■■□□ 2.04
NKX2-4-201ENST00000351817 CPS1P31327 1500 aa27.82■■■□□ 2.04
NKX2-4-201ENST00000351817 ADAMTS13Q76LX8 1427 aa27.81■■■□□ 2.04
NKX2-4-201ENST00000351817 WASLO00401 505 aaPredicted RBP27.81■■■□□ 2.04
NKX2-4-201ENST00000351817 FBLN1P23142 703 aa27.81■■■□□ 2.04
NKX2-4-201ENST00000351817 SIRT1Q96EB6 747 aa27.8■■■□□ 2.04
NKX2-4-201ENST00000351817 CDK12Q9NYV4 1490 aaPredicted RBP27.8■■■□□ 2.04
NKX2-4-201ENST00000351817 LTKP29376 864 aa27.79■■■□□ 2.04
NKX2-4-201ENST00000351817 PHACTR3Q96KR7 559 aa27.78■■■□□ 2.04
NKX2-4-201ENST00000351817 AATKQ6ZMQ8 1374 aa27.78■■■□□ 2.04
NKX2-4-201ENST00000351817 FER1L4A9Z1Z3 1794 aa27.77■■■□□ 2.04
NKX2-4-201ENST00000351817 HMOX1P09601 288 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms