RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 RARSP54136 660 aaKnown RBP27.02■■□□□ 1.92
TRIM3-201ENST00000345851 TRIM44Q96DX7 344 aaPredicted RBP27.01■■□□□ 1.91
TRIM3-201ENST00000345851 ADGRB1O14514 1584 aa27.01■■□□□ 1.91
TRIM3-201ENST00000345851 ESF1Q9H501 851 aaKnown RBP27.01■■□□□ 1.91
TRIM3-201ENST00000345851 RWDD1Q9H446 243 aaPredicted RBP26.99■■□□□ 1.91
TRIM3-201ENST00000345851 MYOM1P52179 1685 aa26.99■■□□□ 1.91
TRIM3-201ENST00000345851 KDM5AP29375 1690 aaKnown RBP26.98■■□□□ 1.91
TRIM3-201ENST00000345851 TNNT2P45379 298 aaPredicted RBP26.97■■□□□ 1.91
TRIM3-201ENST00000345851 DDX11L8A8MPP1 907 aa26.96■■□□□ 1.91
TRIM3-201ENST00000345851 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
TRIM3-201ENST00000345851 HSCBQ8IWL3 235 aa26.96■■□□□ 1.91
TRIM3-201ENST00000345851 CABP2Q9NPB3 220 aa26.96■■□□□ 1.91
TRIM3-201ENST00000345851 TMEM131LA2VDJ0 1609 aa26.95■■□□□ 1.9
TRIM3-201ENST00000345851 GAS2L3Q86XJ1 694 aa26.95■■□□□ 1.9
TRIM3-201ENST00000345851 SETBP1Q9Y6X0 1596 aa26.94■■□□□ 1.9
TRIM3-201ENST00000345851 MINK1Q8N4C8 1332 aaPredicted RBP26.92■■□□□ 1.9
TRIM3-201ENST00000345851 QRICH2Q9H0J4 1663 aa26.91■■□□□ 1.9
TRIM3-201ENST00000345851 ZNF692Q9BU19 519 aaPredicted RBP26.91■■□□□ 1.9
TRIM3-201ENST00000345851 AGLP35573 1532 aa26.9■■□□□ 1.9
TRIM3-201ENST00000345851 ZMYM3Q14202 1370 aa26.9■■□□□ 1.9
TRIM3-201ENST00000345851 CEBPAP49715 358 aaPredicted RBP26.9■■□□□ 1.9
TRIM3-201ENST00000345851 NGEFQ8N5V2 710 aa26.89■■□□□ 1.9
TRIM3-201ENST00000345851 PRAM1Q96QH2 718 aa26.89■■□□□ 1.9
TRIM3-201ENST00000345851 NPC1L1Q9UHC9 1359 aa26.89■■□□□ 1.9
TRIM3-201ENST00000345851 ARHGEF40Q8TER5 1519 aa26.89■■□□□ 1.89
TRIM3-201ENST00000345851 TNPO1Q92973 898 aaKnown RBP26.87■■□□□ 1.89
TRIM3-201ENST00000345851 TCP11L2Q8N4U5 519 aa26.87■■□□□ 1.89
TRIM3-201ENST00000345851 AAMPQ13685 434 aa26.86■■□□□ 1.89
TRIM3-201ENST00000345851 SRPK2P78362 688 aaKnown RBP26.86■■□□□ 1.89
TRIM3-201ENST00000345851 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
TRIM3-201ENST00000345851 FOXD4L1Q9NU39 408 aa26.85■■□□□ 1.89
TRIM3-201ENST00000345851 MYO3AQ8NEV4 1616 aa26.85■■□□□ 1.89
TRIM3-201ENST00000345851 REREQ9P2R6 1566 aa26.85■■□□□ 1.89
TRIM3-201ENST00000345851 FTSJ3Q8IY81 847 aaKnown RBP26.85■■□□□ 1.89
TRIM3-201ENST00000345851 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
TRIM3-201ENST00000345851 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
TRIM3-201ENST00000345851 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
TRIM3-201ENST00000345851 NSD3Q9BZ95 1437 aa26.84■■□□□ 1.89
TRIM3-201ENST00000345851 ISY1Q9ULR0 285 aaKnown RBP26.83■■□□□ 1.89
TRIM3-201ENST00000345851 KIAA1211Q6ZU35 1233 aa26.83■■□□□ 1.89
TRIM3-201ENST00000345851 WAPLQ7Z5K2 1190 aa26.83■■□□□ 1.89
TRIM3-201ENST00000345851 EVC2Q86UK5 1308 aa26.83■■□□□ 1.89
TRIM3-201ENST00000345851 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
TRIM3-201ENST00000345851 TPM2P07951 284 aa26.81■■□□□ 1.88
TRIM3-201ENST00000345851 A2ML1A8K2U0 1454 aa26.81■■□□□ 1.88
TRIM3-201ENST00000345851 HSP90AB1P08238 724 aaKnown RBP26.8■■□□□ 1.88
TRIM3-201ENST00000345851 RUNDC1Q96C34 613 aa26.8■■□□□ 1.88
TRIM3-201ENST00000345851 ZFYVE9O95405 1425 aa26.79■■□□□ 1.88
TRIM3-201ENST00000345851 TULP4Q9NRJ4 1543 aa26.79■■□□□ 1.88
TRIM3-201ENST00000345851 GBP4Q96PP9 640 aa26.79■■□□□ 1.88
TRIM3-201ENST00000345851 YTHDC2Q9H6S0 1430 aaKnown RBP26.78■■□□□ 1.88
TRIM3-201ENST00000345851 RIMS2Q9UQ26 1411 aa26.78■■□□□ 1.88
TRIM3-201ENST00000345851 DDIT3P35638 169 aa26.78■■□□□ 1.88
TRIM3-201ENST00000345851 DZIP1LQ8IYY4 767 aaKnown RBP26.78■■□□□ 1.88
TRIM3-201ENST00000345851 ZKSCAN2Q63HK3 967 aa26.77■■□□□ 1.88
TRIM3-201ENST00000345851 SPATA31D1Q6ZQQ2 1576 aa26.76■■□□□ 1.88
TRIM3-201ENST00000345851 MORC1Q86VD1 984 aa26.76■■□□□ 1.88
TRIM3-201ENST00000345851 PDCL3Q9H2J4 239 aa26.76■■□□□ 1.87
TRIM3-201ENST00000345851 ALKQ9UM73 1620 aa26.75■■□□□ 1.87
TRIM3-201ENST00000345851 POLR3AO14802 1390 aaPredicted RBP26.75■■□□□ 1.87
TRIM3-201ENST00000345851 ITPRIPQ8IWB1 547 aa26.74■■□□□ 1.87
TRIM3-201ENST00000345851 NCOA3Q9Y6Q9 1424 aa26.74■■□□□ 1.87
TRIM3-201ENST00000345851 RBM10P98175 930 aaKnown RBP26.74■■□□□ 1.87
TRIM3-201ENST00000345851 WDR63Q8IWG1 891 aa26.73■■□□□ 1.87
TRIM3-201ENST00000345851 RAB3GAP1Q15042 981 aa26.72■■□□□ 1.87
TRIM3-201ENST00000345851 TSR2Q969E8 191 aaKnown RBP26.72■■□□□ 1.87
TRIM3-201ENST00000345851 PTPRMP28827 1452 aa26.72■■□□□ 1.87
TRIM3-201ENST00000345851 NASPP49321 788 aaPredicted RBP26.72■■□□□ 1.87
TRIM3-201ENST00000345851 SMC5Q8IY18 1101 aa26.72■■□□□ 1.87
TRIM3-201ENST00000345851 TXNDC2Q86VQ3 553 aa26.71■■□□□ 1.87
TRIM3-201ENST00000345851 SMC4Q9NTJ3 1288 aa26.71■■□□□ 1.87
TRIM3-201ENST00000345851 SKOR2Q2VWA4 1001 aaPredicted RBP26.7■■□□□ 1.87
TRIM3-201ENST00000345851 CDK19Q9BWU1 502 aa26.7■■□□□ 1.86
TRIM3-201ENST00000345851 CCDC173Q0VFZ6 552 aa26.69■■□□□ 1.86
TRIM3-201ENST00000345851 TNRQ92752 1358 aa26.69■■□□□ 1.86
TRIM3-201ENST00000345851 CD2BP2O95400 341 aaKnown RBP26.69■■□□□ 1.86
TRIM3-201ENST00000345851 PHF23Q9BUL5 403 aaPredicted RBP26.69■■□□□ 1.86
TRIM3-201ENST00000345851 SNX21Q969T3 373 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 LNPKQ9C0E8 428 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 TRIM27P14373 513 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 RBM25P49756 843 aaKnown RBP26.68■■□□□ 1.86
TRIM3-201ENST00000345851 ZSCAN30Q86W11 494 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 METP08581 1390 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 GGNBP2Q9H3C7 697 aa26.68■■□□□ 1.86
TRIM3-201ENST00000345851 CIZ1Q9ULV3 898 aaPredicted RBP26.67■■□□□ 1.86
TRIM3-201ENST00000345851 MSNP26038 577 aaKnown RBP26.67■■□□□ 1.86
TRIM3-201ENST00000345851 SSFA2P28290 1259 aa26.66■■□□□ 1.86
TRIM3-201ENST00000345851 HDAC1Q13547 482 aaPredicted RBP26.66■■□□□ 1.86
TRIM3-201ENST00000345851 ANP32BQ92688 251 aaKnown RBP26.66■■□□□ 1.86
TRIM3-201ENST00000345851 CABP1Q9NZU7 370 aa26.65■■□□□ 1.86
TRIM3-201ENST00000345851 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
TRIM3-201ENST00000345851 MTHFSP49914 203 aa26.64■■□□□ 1.86
TRIM3-201ENST00000345851 IQSEC2Q5JU85 1478 aa26.64■■□□□ 1.86
TRIM3-201ENST00000345851 SHPRHQ149N8 1683 aa26.64■■□□□ 1.86
TRIM3-201ENST00000345851 RBM42Q9BTD8 480 aaKnown RBP26.64■■□□□ 1.86
TRIM3-201ENST00000345851 DDX49Q9Y6V7 483 aaKnown RBP26.64■■□□□ 1.86
TRIM3-201ENST00000345851 PPP1R9BQ96SB3 815 aa26.63■■□□□ 1.85
TRIM3-201ENST00000345851 OFD1O75665 1012 aa26.63■■□□□ 1.85
TRIM3-201ENST00000345851 EXOSC9Q06265 439 aaKnown RBP26.63■■□□□ 1.85
TRIM3-201ENST00000345851 FAM13BQ9NYF5 915 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms