RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
RPL28-201ENST00000344063 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
RPL28-201ENST00000344063 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
RPL28-201ENST00000344063 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
RPL28-201ENST00000344063 FCHSD2O94868 740 aa13.24□□□□□ -0.29
RPL28-201ENST00000344063 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
RPL28-201ENST00000344063 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
RPL28-201ENST00000344063 ZSCAN30Q86W11 494 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 TESK2Q96S53 571 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 TEFQ10587 303 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
RPL28-201ENST00000344063 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
RPL28-201ENST00000344063 CABP1Q9NZU7 370 aa13.22□□□□□ -0.29
RPL28-201ENST00000344063 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
RPL28-201ENST00000344063 GCC2Q8IWJ2 1684 aa13.22□□□□□ -0.29
RPL28-201ENST00000344063 ADGRL2O95490 1459 aa13.22□□□□□ -0.29
RPL28-201ENST00000344063 ZHX1Q9UKY1 873 aaPredicted RBP13.22□□□□□ -0.29
RPL28-201ENST00000344063 ASXL1Q8IXJ9 1541 aa13.21□□□□□ -0.29
RPL28-201ENST00000344063 PER1O15534 1290 aaPredicted RBP13.21□□□□□ -0.29
RPL28-201ENST00000344063 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.3
RPL28-201ENST00000344063 GNAI3P08754 354 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 CLCN1P35523 988 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
RPL28-201ENST00000344063 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
RPL28-201ENST00000344063 MCM2P49736 904 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 ABCA5Q8WWZ7 1642 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
RPL28-201ENST00000344063 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
RPL28-201ENST00000344063 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
RPL28-201ENST00000344063 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
RPL28-201ENST00000344063 NSD2O96028 1365 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 SEC24BO95487 1268 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
RPL28-201ENST00000344063 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 NPHP1O15259 732 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
RPL28-201ENST00000344063 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
RPL28-201ENST00000344063 MBD3O95983 291 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
RPL28-201ENST00000344063 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
RPL28-201ENST00000344063 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
RPL28-201ENST00000344063 ADGRL1O94910 1474 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 SSFA2P28290 1259 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 NEK4P51957 841 aa13.18□□□□□ -0.3
RPL28-201ENST00000344063 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
RPL28-201ENST00000344063 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
RPL28-201ENST00000344063 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
RPL28-201ENST00000344063 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 TPM4P67936 248 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 CBX1P83916 185 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
RPL28-201ENST00000344063 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 RTEL1-TNFRSF6BF6WH68 1400 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
RPL28-201ENST00000344063 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
RPL28-201ENST00000344063 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 INSRP06213 1382 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 SYCE3A1L190 88 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
RPL28-201ENST00000344063 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
RPL28-201ENST00000344063 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 PLCH2O75038 1416 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 ERC2O15083 957 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
RPL28-201ENST00000344063 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
RPL28-201ENST00000344063 BECN2A8MW95 431 aa13.15□□□□□ -0.3
RPL28-201ENST00000344063 RPAP2Q8IXW5 612 aaPredicted RBP13.15□□□□□ -0.3
RPL28-201ENST00000344063 NOS1P29475 1434 aa13.15□□□□□ -0.3
RPL28-201ENST00000344063 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
RPL28-201ENST00000344063 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
RPL28-201ENST00000344063 GNAI2P04899 355 aa13.15□□□□□ -0.31
RPL28-201ENST00000344063 RNF20Q5VTR2 975 aa13.15□□□□□ -0.31
RPL28-201ENST00000344063 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
RPL28-201ENST00000344063 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
RPL28-201ENST00000344063 H3BQV1 296 aa13.14□□□□□ -0.31
RPL28-201ENST00000344063 DDX58O95786 925 aaKnown RBP13.14□□□□□ -0.31
RPL28-201ENST00000344063 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
RPL28-201ENST00000344063 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
RPL28-201ENST00000344063 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms