RNA–Protein interactions for RNA: ENST00000342558.3

PPP3CB-201, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 5 BASIC

Gene PPP3CB, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-201ENST00000342558 TNNQ9UQP3 1299 aa19.61■□□□□ 0.73
PPP3CB-201ENST00000342558 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
PPP3CB-201ENST00000342558 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
PPP3CB-201ENST00000342558 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
PPP3CB-201ENST00000342558 STK26Q9P289 416 aa19.6■□□□□ 0.73
PPP3CB-201ENST00000342558 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
PPP3CB-201ENST00000342558 NCOA3Q9Y6Q9 1424 aa19.58■□□□□ 0.72
PPP3CB-201ENST00000342558 NEXMIFQ5QGS0 1516 aa19.58■□□□□ 0.72
PPP3CB-201ENST00000342558 AGLP35573 1532 aa19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 ARHGEF40Q8TER5 1519 aa19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 MFAP1P55081 439 aaKnown RBP19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 CARD14Q9BXL6 1004 aa19.57■□□□□ 0.72
PPP3CB-201ENST00000342558 DDIT3P35638 169 aa19.56■□□□□ 0.72
PPP3CB-201ENST00000342558 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
PPP3CB-201ENST00000342558 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
PPP3CB-201ENST00000342558 REREQ9P2R6 1566 aa19.56■□□□□ 0.72
PPP3CB-201ENST00000342558 SHPRHQ149N8 1683 aa19.55■□□□□ 0.72
PPP3CB-201ENST00000342558 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
PPP3CB-201ENST00000342558 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
PPP3CB-201ENST00000342558 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
PPP3CB-201ENST00000342558 RUNDC1Q96C34 613 aa19.54■□□□□ 0.72
PPP3CB-201ENST00000342558 BCL2L13Q9BXK5 485 aa19.54■□□□□ 0.72
PPP3CB-201ENST00000342558 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
PPP3CB-201ENST00000342558 TRIM44Q96DX7 344 aaPredicted RBP19.53■□□□□ 0.72
PPP3CB-201ENST00000342558 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
PPP3CB-201ENST00000342558 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
PPP3CB-201ENST00000342558 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
PPP3CB-201ENST00000342558 TPM2P07951 284 aa19.52■□□□□ 0.71
PPP3CB-201ENST00000342558 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.71
PPP3CB-201ENST00000342558 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.71
PPP3CB-201ENST00000342558 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
PPP3CB-201ENST00000342558 GAS2L3Q86XJ1 694 aa19.51■□□□□ 0.71
PPP3CB-201ENST00000342558 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
PPP3CB-201ENST00000342558 SNX21Q969T3 373 aa19.5■□□□□ 0.71
PPP3CB-201ENST00000342558 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
PPP3CB-201ENST00000342558 CIZ1Q9ULV3 898 aaPredicted RBP19.49■□□□□ 0.71
PPP3CB-201ENST00000342558 HDAC1Q13547 482 aaPredicted RBP19.49■□□□□ 0.71
PPP3CB-201ENST00000342558 SMC5Q8IY18 1101 aa19.49■□□□□ 0.71
PPP3CB-201ENST00000342558 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
PPP3CB-201ENST00000342558 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
PPP3CB-201ENST00000342558 SKOR2Q2VWA4 1001 aaPredicted RBP19.47■□□□□ 0.71
PPP3CB-201ENST00000342558 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
PPP3CB-201ENST00000342558 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
PPP3CB-201ENST00000342558 DZIP1LQ8IYY4 767 aaKnown RBP19.47■□□□□ 0.71
PPP3CB-201ENST00000342558 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
PPP3CB-201ENST00000342558 PTMSP20962 102 aa19.45■□□□□ 0.7
PPP3CB-201ENST00000342558 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
PPP3CB-201ENST00000342558 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
PPP3CB-201ENST00000342558 QRICH2Q9H0J4 1663 aa19.45■□□□□ 0.7
PPP3CB-201ENST00000342558 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
PPP3CB-201ENST00000342558 PDCL3Q9H2J4 239 aa19.44■□□□□ 0.7
PPP3CB-201ENST00000342558 CABP2Q9NPB3 220 aa19.44■□□□□ 0.7
PPP3CB-201ENST00000342558 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
PPP3CB-201ENST00000342558 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
PPP3CB-201ENST00000342558 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
PPP3CB-201ENST00000342558 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
PPP3CB-201ENST00000342558 MINK1Q8N4C8 1332 aaPredicted RBP19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 CCDC173Q0VFZ6 552 aa19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 PPP1R9BQ96SB3 815 aa19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
PPP3CB-201ENST00000342558 RIMS2Q9UQ26 1411 aa19.41■□□□□ 0.7
PPP3CB-201ENST00000342558 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 KIAA1211Q6ZU35 1233 aa19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 NSD3Q9BZ95 1437 aa19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 SBNO2Q9Y2G9 1366 aa19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 ARHGEF28Q8N1W1 1705 aaKnown RBP19.4■□□□□ 0.7
PPP3CB-201ENST00000342558 TRIM27P14373 513 aa19.39■□□□□ 0.69
PPP3CB-201ENST00000342558 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
PPP3CB-201ENST00000342558 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
PPP3CB-201ENST00000342558 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
PPP3CB-201ENST00000342558 ZSCAN30Q86W11 494 aa19.38■□□□□ 0.69
PPP3CB-201ENST00000342558 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
PPP3CB-201ENST00000342558 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
PPP3CB-201ENST00000342558 TNRQ92752 1358 aa19.37■□□□□ 0.69
PPP3CB-201ENST00000342558 YTHDC2Q9H6S0 1430 aaKnown RBP19.37■□□□□ 0.69
PPP3CB-201ENST00000342558 IBTKQ9P2D0 1353 aaPredicted RBP19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 OFD1O75665 1012 aa19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 NASPP49321 788 aaPredicted RBP19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 SMC4Q9NTJ3 1288 aa19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
PPP3CB-201ENST00000342558 KIF2CQ99661 725 aa19.35■□□□□ 0.69
PPP3CB-201ENST00000342558 MTHFSP49914 203 aa19.35■□□□□ 0.69
PPP3CB-201ENST00000342558 NUCB1Q02818 461 aa19.35■□□□□ 0.69
PPP3CB-201ENST00000342558 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
PPP3CB-201ENST00000342558 TERF1P54274 439 aa19.34■□□□□ 0.69
PPP3CB-201ENST00000342558 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
PPP3CB-201ENST00000342558 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
PPP3CB-201ENST00000342558 TULP4Q9NRJ4 1543 aa19.34■□□□□ 0.69
PPP3CB-201ENST00000342558 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.69
PPP3CB-201ENST00000342558 USP32Q8NFA0 1604 aa19.33■□□□□ 0.69
PPP3CB-201ENST00000342558 PTPRMP28827 1452 aa19.32■□□□□ 0.68
PPP3CB-201ENST00000342558 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
PPP3CB-201ENST00000342558 SSH1Q8WYL5 1049 aa19.32■□□□□ 0.68
PPP3CB-201ENST00000342558 ANP32BQ92688 251 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms