RNA–Protein interactions for RNA: ENST00000342558.3

PPP3CB-201, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 5 BASIC

Gene PPP3CB, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-201ENST00000342558 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
PPP3CB-201ENST00000342558 CCDC180Q9P1Z9 1646 aa27.28■■□□□ 1.96
PPP3CB-201ENST00000342558 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
PPP3CB-201ENST00000342558 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
PPP3CB-201ENST00000342558 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.85
PPP3CB-201ENST00000342558 HRCP23327 699 aa26.15■■□□□ 1.78
PPP3CB-201ENST00000342558 ABCC9O60706 1549 aa26.03■■□□□ 1.76
PPP3CB-201ENST00000342558 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
PPP3CB-201ENST00000342558 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.75
PPP3CB-201ENST00000342558 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
PPP3CB-201ENST00000342558 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
PPP3CB-201ENST00000342558 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
PPP3CB-201ENST00000342558 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
PPP3CB-201ENST00000342558 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
PPP3CB-201ENST00000342558 NACADO15069 1562 aa25.42■■□□□ 1.66
PPP3CB-201ENST00000342558 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
PPP3CB-201ENST00000342558 PELP1Q8IZL8 1130 aaKnown RBP25.01■■□□□ 1.59
PPP3CB-201ENST00000342558 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
PPP3CB-201ENST00000342558 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
PPP3CB-201ENST00000342558 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
PPP3CB-201ENST00000342558 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
PPP3CB-201ENST00000342558 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
PPP3CB-201ENST00000342558 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
PPP3CB-201ENST00000342558 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
PPP3CB-201ENST00000342558 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.53
PPP3CB-201ENST00000342558 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
PPP3CB-201ENST00000342558 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
PPP3CB-201ENST00000342558 WIZO95785 1651 aa24.48■■□□□ 1.51
PPP3CB-201ENST00000342558 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
PPP3CB-201ENST00000342558 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
PPP3CB-201ENST00000342558 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
PPP3CB-201ENST00000342558 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
PPP3CB-201ENST00000342558 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
PPP3CB-201ENST00000342558 MYT1Q01538 1121 aa24.01■■□□□ 1.43
PPP3CB-201ENST00000342558 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
PPP3CB-201ENST00000342558 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
PPP3CB-201ENST00000342558 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
PPP3CB-201ENST00000342558 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
PPP3CB-201ENST00000342558 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
PPP3CB-201ENST00000342558 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
PPP3CB-201ENST00000342558 GTF3C3Q9Y5Q9 886 aa23.8■■□□□ 1.4
PPP3CB-201ENST00000342558 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
PPP3CB-201ENST00000342558 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
PPP3CB-201ENST00000342558 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
PPP3CB-201ENST00000342558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
PPP3CB-201ENST00000342558 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
PPP3CB-201ENST00000342558 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
PPP3CB-201ENST00000342558 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
PPP3CB-201ENST00000342558 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
PPP3CB-201ENST00000342558 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
PPP3CB-201ENST00000342558 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
PPP3CB-201ENST00000342558 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
PPP3CB-201ENST00000342558 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
PPP3CB-201ENST00000342558 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
PPP3CB-201ENST00000342558 SOGA1O94964 1423 aa23.29■■□□□ 1.32
PPP3CB-201ENST00000342558 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
PPP3CB-201ENST00000342558 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
PPP3CB-201ENST00000342558 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
PPP3CB-201ENST00000342558 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
PPP3CB-201ENST00000342558 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
PPP3CB-201ENST00000342558 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
PPP3CB-201ENST00000342558 CFTRP13569 1480 aa23.14■■□□□ 1.29
PPP3CB-201ENST00000342558 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
PPP3CB-201ENST00000342558 MIER1Q8N108 512 aa23.12■■□□□ 1.29
PPP3CB-201ENST00000342558 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.29
PPP3CB-201ENST00000342558 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
PPP3CB-201ENST00000342558 TOP2BQ02880 1626 aa23■■□□□ 1.27
PPP3CB-201ENST00000342558 CUX1P39880 1505 aa22.97■■□□□ 1.27
PPP3CB-201ENST00000342558 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
PPP3CB-201ENST00000342558 EEA1Q15075 1411 aa22.97■■□□□ 1.27
PPP3CB-201ENST00000342558 NESP48681 1621 aa22.96■■□□□ 1.27
PPP3CB-201ENST00000342558 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
PPP3CB-201ENST00000342558 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
PPP3CB-201ENST00000342558 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
PPP3CB-201ENST00000342558 GOLGA3Q08378 1498 aa22.86■■□□□ 1.25
PPP3CB-201ENST00000342558 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
PPP3CB-201ENST00000342558 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
PPP3CB-201ENST00000342558 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
PPP3CB-201ENST00000342558 SUPT16HQ9Y5B9 1047 aaKnown RBP22.75■■□□□ 1.23
PPP3CB-201ENST00000342558 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
PPP3CB-201ENST00000342558 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
PPP3CB-201ENST00000342558 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
PPP3CB-201ENST00000342558 KIF21BO75037 1637 aa22.67■■□□□ 1.22
PPP3CB-201ENST00000342558 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
PPP3CB-201ENST00000342558 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
PPP3CB-201ENST00000342558 CUX2O14529 1486 aa22.64■■□□□ 1.22
PPP3CB-201ENST00000342558 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
PPP3CB-201ENST00000342558 CLIP1P30622 1438 aa22.62■■□□□ 1.21
PPP3CB-201ENST00000342558 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
PPP3CB-201ENST00000342558 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
PPP3CB-201ENST00000342558 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
PPP3CB-201ENST00000342558 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
PPP3CB-201ENST00000342558 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
PPP3CB-201ENST00000342558 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
PPP3CB-201ENST00000342558 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
PPP3CB-201ENST00000342558 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
PPP3CB-201ENST00000342558 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
PPP3CB-201ENST00000342558 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
PPP3CB-201ENST00000342558 IGF1RP08069 1367 aa22.52■■□□□ 1.2
PPP3CB-201ENST00000342558 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms