RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ERBB4Q15303 1308 aa21.5■■□□□ 1.03
CDK11B-201ENST00000340677 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
CDK11B-201ENST00000340677 TMC1Q8TDI8 760 aa21.49■■□□□ 1.03
CDK11B-201ENST00000340677 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
CDK11B-201ENST00000340677 GEMIN8Q9NWZ8 242 aaKnown RBP21.48■■□□□ 1.03
CDK11B-201ENST00000340677 POGKQ9P215 609 aa21.48■■□□□ 1.03
CDK11B-201ENST00000340677 CCDC7Q96M83 1385 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 XRCC6P12956 609 aaKnown RBP eCLIP21.47■■□□□ 1.03
CDK11B-201ENST00000340677 SH3BP1Q9Y3L3 701 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 IRF6O14896 467 aa21.46■■□□□ 1.03
CDK11B-201ENST00000340677 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
CDK11B-201ENST00000340677 SETBP1Q9Y6X0 1596 aa21.45■■□□□ 1.02
CDK11B-201ENST00000340677 YY1AP1Q9H869 796 aa21.45■■□□□ 1.02
CDK11B-201ENST00000340677 MYO5BQ9ULV0 1848 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 ZFYVE9O95405 1425 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 MPNDQ8N594 471 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 ZNF526Q8TF50 670 aaPredicted RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 CCDC94Q9BW85 323 aaPredicted RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 TERF1P54274 439 aa21.42■■□□□ 1.02
CDK11B-201ENST00000340677 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
CDK11B-201ENST00000340677 PANK2Q9BZ23 570 aa21.4■■□□□ 1.02
CDK11B-201ENST00000340677 PIK3C2GO75747 1445 aa21.39■■□□□ 1.02
CDK11B-201ENST00000340677 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
CDK11B-201ENST00000340677 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
CDK11B-201ENST00000340677 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.01
CDK11B-201ENST00000340677 SEMA3FQ13275 785 aa21.38■■□□□ 1.01
CDK11B-201ENST00000340677 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
CDK11B-201ENST00000340677 IDI1Q13907 227 aa21.37■■□□□ 1.01
CDK11B-201ENST00000340677 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 NBPF20Q3BBV1 942 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 MYO3AQ8NEV4 1616 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
CDK11B-201ENST00000340677 TRIM44Q96DX7 344 aaPredicted RBP21.35■■□□□ 1.01
CDK11B-201ENST00000340677 FER1L4A9Z1Z3 1794 aa21.35■■□□□ 1.01
CDK11B-201ENST00000340677 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
CDK11B-201ENST00000340677 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
CDK11B-201ENST00000340677 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
CDK11B-201ENST00000340677 SLC4A3P48751 1232 aa21.33■■□□□ 1.01
CDK11B-201ENST00000340677 ANAPC15P60006 121 aa21.33■■□□□ 1.01
CDK11B-201ENST00000340677 SETQ01105 290 aaPredicted RBP21.33■■□□□ 1.01
CDK11B-201ENST00000340677 PDE4AP27815 886 aa21.33■■□□□ 1
CDK11B-201ENST00000340677 CEP120Q8N960 986 aa21.33■■□□□ 1
CDK11B-201ENST00000340677 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
CDK11B-201ENST00000340677 GPATCH11Q8N954 259 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 LOC102724159A0A0B4J2E5 919 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
CDK11B-201ENST00000340677 PWP2Q15269 919 aaKnown RBP21.32■■□□□ 1
CDK11B-201ENST00000340677 BANK1Q8NDB2 785 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
CDK11B-201ENST00000340677 MLECQ14165 292 aa21.31■■□□□ 1
CDK11B-201ENST00000340677 ADGRB1O14514 1584 aa21.31■■□□□ 1
CDK11B-201ENST00000340677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.3■■□□□ 1
CDK11B-201ENST00000340677 KCNJ4P48050 445 aa21.3■■□□□ 1
CDK11B-201ENST00000340677 C3P01024 1663 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 OFD1O75665 1012 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 BACH2Q9BYV9 841 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
CDK11B-201ENST00000340677 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 FSD2A1L4K1 749 aa21.28■■□□□ 1
CDK11B-201ENST00000340677 TCERG1O14776 1098 aaKnown RBP21.28■■□□□ 1
CDK11B-201ENST00000340677 TESK2Q96S53 571 aa21.28■■□□□ 1
CDK11B-201ENST00000340677 CWC22Q9HCG8 908 aaKnown RBP21.27■■□□□ 1
CDK11B-201ENST00000340677 TNRQ92752 1358 aa21.26■□□□□ 0.99
CDK11B-201ENST00000340677 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
CDK11B-201ENST00000340677 SBNO2Q9Y2G9 1366 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 CFAP70Q5T0N1 1121 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 UBR1Q8IWV7 1749 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
CDK11B-201ENST00000340677 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 TRIM6-TRIM34B2RNG4 842 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.23■□□□□ 0.99
CDK11B-201ENST00000340677 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 STK26Q9P289 416 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
CDK11B-201ENST00000340677 PLCB2Q00722 1185 aa21.22■□□□□ 0.99
CDK11B-201ENST00000340677 TMF1P82094 1093 aa21.21■□□□□ 0.99
CDK11B-201ENST00000340677 ARHGEF28Q8N1W1 1705 aaKnown RBP21.2■□□□□ 0.98
CDK11B-201ENST00000340677 CBX1P83916 185 aa21.2■□□□□ 0.98
CDK11B-201ENST00000340677 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
CDK11B-201ENST00000340677 UQCRHLA0A096LP55 91 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 ZNF500O60304 480 aaPredicted RBP21.19■□□□□ 0.98
CDK11B-201ENST00000340677 UQCRHP07919 91 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
CDK11B-201ENST00000340677 DYNC1I1O14576 645 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
CDK11B-201ENST00000340677 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
CDK11B-201ENST00000340677 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 NBPF11Q86T75 865 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ALKQ9UM73 1620 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ASXL1Q8IXJ9 1541 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 CT47A1Q5JQC4 288 aaPredicted RBP21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDK11B-201ENST00000340677 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
CDK11B-201ENST00000340677 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms